| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0641 |
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| Symbol | sdhA |
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| ID | 3775624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 634089 |
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| End bp | 635996 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799053 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_399660 |
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| Protein GI | 81299452 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.889552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCTGA ATGCCCAGCT GCCCCAAGGC CCTCTGGCAG GGGCTTGGCA GCGCTACCGT
GACACATTGC CGTTGATTAG TCCGCTGCGC AAGCGGCAGT TCGACATTCT GGTAGTGGGT
ACAGGTCTGG CCGGGGCTTC TGCCGCCGCA ACCTTGGCGG AACAGGGCTA TCGAGTCAAG
GTTTTTACCT ACCACGACAG CCCACGACGA GCCCATAGCG TGGCGGCTCA GGGCGGGATC
AATGCCGCCA AAAACTACCA GAACGACGGG GACAGCGATT TTCGGTTGTT CGCCGACATG
CTCAAAGGCG GAGACTTTCG ATCGCGCGAT GCCAATGTCT ACCGCTTGGC AGAACTGAGC
GGCGCCATCA TTGATCAATG TGTGGCCCAA GGCGTCCCCT TTGCCCGCGA GTACGGCGGC
ACCTTAGCGA ATCGCACCTT CGGCGGTGTT CTCGTCTCGC GGACTTTTTA TGCACGGGGA
CAAACGGGTC AGCAGCTGCT CTACGGCGCT TACGGCGCTT TGATGCGTCA GGTGGCGACG
GGGACGGTGG AATTACACAC CCATGCCGAT GTCCTTGACC TTGTAACCGT CGATGGCAAT
GCGCGGGGTC TGGTGATTCG CAATCTCCGC ACAGGAGAAC TGTCCATTGA AACTGGGGCA
GCGGTCCTGC TCTGCACGGG TGGTTATAGC AACGTCTATT ACCTCTCAAC CAATGCGGTC
AAGTCCAACG CTTCAGCGAC TTGGCGGGCG CATCGACGGG GCGCATTTTT TGCCAACCCC
TGCTTCACCC AAATTCACCC CACCTGCATT CCCAGTGGCG ATGCCTATCA GTCAAAACTG
ACTCTGATGA GCGAGAGCCT ACGCAATGAT GGACGCGTTT GGGTTCCGGT ACAAGCAGGC
GATCGGCGAT CGCCGGATCA AATCCCCGAG ATCGATCGCG ATTACTTTCT AGAAACCCGC
TATCCTCGCT ACGGCAACAT GGTGCCGCGG GATATTGCCT CCCGTCAGGC AAAACGGATT
TGCGATCGCG GCTACGGCGT TGGTGGAACG GGTCGCGCCG TCTATCTGGA TTTTGCAGAG
GCGATCGCCC GCGATGGTCA GGCCGAAATT CAGCGCAAAT ACGGCAATCT CTTCGACATG
TATGCCCGCA TCAGTGGCGA GGATCCCTAC GCCACGCCGA TGCGCATTTA CCCTGCACCC
CACTACACCA TGGGCGGACT GTGGGTGGAT TACAACCTGA TGAGCAACCT GCCGGGTCTA
TTCGTGCTGG GCGAGGCCAA CTTCTCCGAT CACGGGGCGA ATCGGCTGGG TGCGAGTGCC
TTGATGCAGG GCCTCGCCGA CGGTTATTTC ATTGCGCCCG CCACCGTTAC CGGCTGGCTT
GCTGGTCAGT CCCAGACTGC CATAACACCC GATCATCCGG CCTGTCAGGA AGCCCTTGCT
GAAGCTCAAG CCCGCATTGA TCAATTGCTC GCGATTCAGG GCGATCGCAG TGTCGATAGT
TTGCATCGTG AACTGGGCGA GATTTTGCTA GATGCTTGCG GCATCAGCCG CGATCGCGAT
CGCCTGCTCA AAGCGCGGCA ACAGGTTCAA CATCTACAGC AGACTTTTCG CGATCGGGTG
CGAGTTCCGG GTTCAGCAGC CGGGTTGAAT CCTGAGCTAG AGAAAGCGCT CCGGTTGGCT
GACTTTTTAG AGCTGGGTGA ACTGATGATT GTGGATGCTC TGCACCGTGA AGAATCCTGC
GGGGCCCACT TCCGCGAGGA ACATCAAACT GAAGACGGTG AAGCCCTGCG ACGAGACGAT
CAATTCAGCT ATGTCGCAGC TTGGGAATAC AGCAACACAG AACCACAACT GCATCGCGAT
CGTTTGGAGT TCAAGACGTT AGTTCCCAGC CAGCGAAACT ATCAATAG
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| Protein sequence | MILNAQLPQG PLAGAWQRYR DTLPLISPLR KRQFDILVVG TGLAGASAAA TLAEQGYRVK
VFTYHDSPRR AHSVAAQGGI NAAKNYQNDG DSDFRLFADM LKGGDFRSRD ANVYRLAELS
GAIIDQCVAQ GVPFAREYGG TLANRTFGGV LVSRTFYARG QTGQQLLYGA YGALMRQVAT
GTVELHTHAD VLDLVTVDGN ARGLVIRNLR TGELSIETGA AVLLCTGGYS NVYYLSTNAV
KSNASATWRA HRRGAFFANP CFTQIHPTCI PSGDAYQSKL TLMSESLRND GRVWVPVQAG
DRRSPDQIPE IDRDYFLETR YPRYGNMVPR DIASRQAKRI CDRGYGVGGT GRAVYLDFAE
AIARDGQAEI QRKYGNLFDM YARISGEDPY ATPMRIYPAP HYTMGGLWVD YNLMSNLPGL
FVLGEANFSD HGANRLGASA LMQGLADGYF IAPATVTGWL AGQSQTAITP DHPACQEALA
EAQARIDQLL AIQGDRSVDS LHRELGEILL DACGISRDRD RLLKARQQVQ HLQQTFRDRV
RVPGSAAGLN PELEKALRLA DFLELGELMI VDALHREESC GAHFREEHQT EDGEALRRDD
QFSYVAAWEY SNTEPQLHRD RLEFKTLVPS QRNYQ
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