Gene Synpcc7942_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0606 
Symbolaat 
ID3775588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp594687 
End bp595367 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content57% 
IMG OID637799017 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_399625 
Protein GI81299417 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.188078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.585196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCA CAACTATAGC GATGGACTTC TGCCAGACTG TGACACCGTC AGAAATCGCA 
ACGGTGATTG ATTCCTACGC CCGCGGCTGG TTCTTGATGG CGGATGAGGA TAGCAGTGAT
TTGGGCTGGT ATCGCAGTCG CGATCGCTGC CTGATCCCCT TGGACAATCG CTTTCGCTAT
CCACGATCGC TGCGGCGGGT GCTAAACCAA CAGCGGTTTG AGTTCGCGAT CAGCCGGGAT
TTTTTGGGCA CGATTGCTGG CTGTGCCGAT CGCCCCAGCA CTTGGATTTC TGACGAGCTA
GCAGAGATTT ACCAACAGCT ACAGCGGTAC GGCTGGGCTT TGAGCTGGGA AGCTTGGCAG
GGCGATCGCT TGGTGGGCGG CATCCTTGGA GTTGCGATTG GCTCCTTATT TATCGGCGAG
TCGATGTTTT ACCACGAGCC GGAAGCCTCG AAAGCCGCAC TTGTGACGCT CGTTCAAGCC
CTGCAGCAGG GAGGCTGGCA GGTGTTTGAT GTACAGCTGA CCAACCCGCA CCTTGAACGC
TTTGGCAGTT TTTGCGTCAG CGATCGGCAG TATTCCGCGC AAATTCAGAC CGCGATCGCT
CGACCCGCAA AGTTGGTCAC CCCCACCGGC GATCGCTTCG CCAGCCAGCC CCACTCCTCC
GCAGCATCTG ACCATGGCTG A
 
Protein sequence
MIATTIAMDF CQTVTPSEIA TVIDSYARGW FLMADEDSSD LGWYRSRDRC LIPLDNRFRY 
PRSLRRVLNQ QRFEFAISRD FLGTIAGCAD RPSTWISDEL AEIYQQLQRY GWALSWEAWQ
GDRLVGGILG VAIGSLFIGE SMFYHEPEAS KAALVTLVQA LQQGGWQVFD VQLTNPHLER
FGSFCVSDRQ YSAQIQTAIA RPAKLVTPTG DRFASQPHSS AASDHG