Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0590 |
Symbol | |
ID | 3775210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 578620 |
End bp | 578967 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799001 |
Product | membrane protein-like |
Protein accession | YP_399609 |
Protein GI | 81299401 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0431355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.533065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGCTC CTTCTTCTGA CCTAGAGACG CCAACGCTCA CCGAAGCCAG TCCGGGTCGG TCTTCAGCTT GGGGTGTGTT TGTCTCGACT TTTCTGACCA TTTTTCTGGC CGAACTCGGC GACAAAACCC AGGTCACCAC GTTGCTGATG ACAGTGGAGT CCCATCGGCC TTGGATTGTG TTTACCGGTG CAGCGACAGC CTTGATCAGC ACGAGTTTGC TGGGCGTTCT GGTAGGTCGT TGGCTGGCGC AACATATTGC CCCACGCACC CTGGATGTTG CAGCTGGCGT GACGCTGCTA GCGATCGCAG CAGTCCTGAG TTGGGATCTC TGGCAGCACT GGAGCTAA
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Protein sequence | MAAPSSDLET PTLTEASPGR SSAWGVFVST FLTIFLAELG DKTQVTTLLM TVESHRPWIV FTGAATALIS TSLLGVLVGR WLAQHIAPRT LDVAAGVTLL AIAAVLSWDL WQHWS
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