Gene Synpcc7942_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0590 
Symbol 
ID3775210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp578620 
End bp578967 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content57% 
IMG OID637799001 
Productmembrane protein-like 
Protein accessionYP_399609 
Protein GI81299401 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0431355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.533065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCTC CTTCTTCTGA CCTAGAGACG CCAACGCTCA CCGAAGCCAG TCCGGGTCGG 
TCTTCAGCTT GGGGTGTGTT TGTCTCGACT TTTCTGACCA TTTTTCTGGC CGAACTCGGC
GACAAAACCC AGGTCACCAC GTTGCTGATG ACAGTGGAGT CCCATCGGCC TTGGATTGTG
TTTACCGGTG CAGCGACAGC CTTGATCAGC ACGAGTTTGC TGGGCGTTCT GGTAGGTCGT
TGGCTGGCGC AACATATTGC CCCACGCACC CTGGATGTTG CAGCTGGCGT GACGCTGCTA
GCGATCGCAG CAGTCCTGAG TTGGGATCTC TGGCAGCACT GGAGCTAA
 
Protein sequence
MAAPSSDLET PTLTEASPGR SSAWGVFVST FLTIFLAELG DKTQVTTLLM TVESHRPWIV 
FTGAATALIS TSLLGVLVGR WLAQHIAPRT LDVAAGVTLL AIAAVLSWDL WQHWS