Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0588 |
Symbol | purT |
ID | 3774829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 576665 |
End bp | 577840 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637798999 |
Product | phosphoribosylglycinamide formyltransferase 2 |
Protein accession | YP_399607 |
Protein GI | 81299399 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) |
TIGRFAM ID | [TIGR01142] phosphoribosylglycinamide formyltransferase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0195423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.620733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTTG CCGATCGCCT GCCGCGTCGT CTCATGTTGC TGGGTTCTGG AGAGCTGGGT AAGGAATTTG CGATCGCAGC GCAACGACTA GGAAATACAG TCATTGCTGT CGATCGCTAT GCCCACGCAC CCGCTATGCA GGTTGCCGAT GCCAGTGCGG TGATTTCCAT GCTGGATGGC GAAGCCCTCG AAGCAGTGGT TCAAGAATTT CAGCCAGACC TGATCATCCC GGAGATTGAA GCGATCCGCA CCGAGAAGCT GCAGGAGTTT GAAGATCGCG GCTTGACGGT GATTCCGACG GCGCGGGCCA CGCACTTCAC CATGAACCGC GATCGCATTC GTGATCTAGC AGCTCAGCAA TTGGGTCTGC GCACCGCTCG CTATGCTTAC GCCAGTTGCT TTGAAGAACT GCAGACCGTC GCTGCCGCGA TCGGTTACCC GAATGTGATC AAGCCGGTGA TGTCCTCCTC CGGTAAAGGC CAATCAATCA TCCAGCAGCC GGATCAACTC CAAGCTGCCT GGGACTACGC GATCGCGGGA TCTCGCGGTG ATAGCCAGAA GGTAATTCTG GAAGAGTTCA TCCCATTCGA GCTGGAAATT ACGCTGTTGA CCATTCGTCA GTGGCAAGGC CCCACTCTTT TCTGTCCGCC GATTGGTCAC CGGCAAGAAC GCGGCGACTA TCAGGAATCT TGGCAGCCCG CACCGCTTCG GCCAGACTTA CTGGCGCAGG CACAAGCGAT CGCCGCACAA GTGACCGAGG CTTTAGGCGG AGCTGGGTTA TTCGGCGTTG AATTTTTTGT TACCCCGGAT GAAGTGATCT TTTCAGAGCT GTCGCCGCGC CCCCACGACA CTGGCATGGT CACGCTCATC TCGCAAAATC TGAATGAATT TGAGCTACAT CTTCGCGCCG TACTCGGGCT GCCAATTCCC GCGATCGAGC TATTGGGGCC ATCAGCGAGT CGAGTCATTC TGGCAGAAGA CAGTGGCGAT CGCCCCAGCT ATGCCGGAGT TGCAGCAGCG CTGCAGGAGC CTTGGGTTGA TCTGCGACTG TTTGGTAAAC CGGATATGCG GCCTCAGCGG CGGATGGGAG TTGCCTTGGC ACGAGATGAG AGTGTTGAAG CCGCACGGGC GAAAGCCGAT CGTGCCGCTT CCCAAGTGAC GATTCAACCC AGTTAA
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Protein sequence | MTFADRLPRR LMLLGSGELG KEFAIAAQRL GNTVIAVDRY AHAPAMQVAD ASAVISMLDG EALEAVVQEF QPDLIIPEIE AIRTEKLQEF EDRGLTVIPT ARATHFTMNR DRIRDLAAQQ LGLRTARYAY ASCFEELQTV AAAIGYPNVI KPVMSSSGKG QSIIQQPDQL QAAWDYAIAG SRGDSQKVIL EEFIPFELEI TLLTIRQWQG PTLFCPPIGH RQERGDYQES WQPAPLRPDL LAQAQAIAAQ VTEALGGAGL FGVEFFVTPD EVIFSELSPR PHDTGMVTLI SQNLNEFELH LRAVLGLPIP AIELLGPSAS RVILAEDSGD RPSYAGVAAA LQEPWVDLRL FGKPDMRPQR RMGVALARDE SVEAARAKAD RAASQVTIQP S
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