| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0571 |
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| Symbol | |
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| ID | 3774809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 553324 |
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| End bp | 554697 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637798979 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_399590 |
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| Protein GI | 81299382 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.74034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0218606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCTC AACTCGACCT ACGCACCAAA CTCAGCTTCG GAGTTGGTGA CTTTGGCACA
GCAGTCATGG CGAATTTGCA GGTTTTCTTC CTGCTCTTTT TTCTAACGAC GGTAGCGGGC
TTGGATGCCG CTTGGGCCGG CAGCATCCTG ATGATTGGCA AGGTTTGGGA TGCCGTCAAT
GACCCCTTGA TTGGCTGGTT GAGCGATCGC ACCAAGAGTC GCAACTGGGG CCGCCGCTAC
CCTTGGATGC TCTGGGCTGC TATTCCCCTC GGACTCACTT TTTACTTGCA GTGGATTGTT
CCGACTCAGA ATCCAACTTG GCTCTTTATT TTCTATGTCG TGGTTGCACT GCTGTTTAAC
AGCTTCTACA CAGCGGTTAA CTTGCCTTAC ACCGCCCTGA CGCCGGAGCT GACCCAGGAC
TACAACGATC GCACAAAACT CAACAGCTTT CGCTTTAGCT TTTCGATTGG CGGCAGTATC
CTCTCGCTCT TGCTCGCTCA GGCAATTTTT AGCCTCATTC CCAATCCACA AGAACAGTAC
CAATGGCTAG GGGCGATCGC AGCGATCGCG TCAGTCCTTC CCGTCTTTAT CTGTGTTTGG
GGCACCCGTC GTCGCTATCA GTTCATGCAG CCGTTGGTCG AAACCACTCT ACCGCCACGC
CAATCGATTG CCGAAGAATT GCAGGTCGTC AAAGGCAATA AACCATTCTT ATTTGTGATT
GGCCTTTACC TCTGCTCTTG GCTAGCCGTG CAAGCGACAG CCTCCGTGAT TCCCTACTTT
GTCCGCTACT GGATGCGATT GCCCGACCCC GATCTCACTT CAGTGATGTT GGCAGTGCAG
GGCACCGCGT TAGTCACTCT TTTTGGCTGG AGTTGGCTGA GCAATCGCAT TGGCAAACAG
GCCGTTTATT ACTGGGGTAC CGGCTTATGG CTAATCGCCC AAGTCGGCCT GTTTGTTCTG
CAACCCAACC AAGTGGGTCT GATGTATGTC ATGGCGATCT TGGCCGGTTG TGGTGTTTCC
GTGGCTTACC TGATTCCTTG GTCAATGCTG CCGGATGTGA TCGAATGGGA TGAGCTGCAA
ACGGGTCAGC GCCGCGAGGG GATTTACTAC GGCTTCATGG TCTTTTTGCA AAAACTCGCA
CTGGCGTTGG GTTTATTTAT CGTTGGCCAA GCGCTGTCGC TCGCTGGTTT GATTCCCGGT
GACTCAACCG TTGTTCAACC TGACAGCGCC CTCTGGGCAA TTCGAGTCGC AGTTGCACCC
TTCCCCACAC TCTGTCTGAT TTTGGGAATC CTCTGCGCCA AGGGCTATCC GATTACCCGC
GATCGCCACG AAGCCATGCT CTTACAACTT GCCGAACGGC GATCGCAGGT CTAG
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| Protein sequence | MIPQLDLRTK LSFGVGDFGT AVMANLQVFF LLFFLTTVAG LDAAWAGSIL MIGKVWDAVN
DPLIGWLSDR TKSRNWGRRY PWMLWAAIPL GLTFYLQWIV PTQNPTWLFI FYVVVALLFN
SFYTAVNLPY TALTPELTQD YNDRTKLNSF RFSFSIGGSI LSLLLAQAIF SLIPNPQEQY
QWLGAIAAIA SVLPVFICVW GTRRRYQFMQ PLVETTLPPR QSIAEELQVV KGNKPFLFVI
GLYLCSWLAV QATASVIPYF VRYWMRLPDP DLTSVMLAVQ GTALVTLFGW SWLSNRIGKQ
AVYYWGTGLW LIAQVGLFVL QPNQVGLMYV MAILAGCGVS VAYLIPWSML PDVIEWDELQ
TGQRREGIYY GFMVFLQKLA LALGLFIVGQ ALSLAGLIPG DSTVVQPDSA LWAIRVAVAP
FPTLCLILGI LCAKGYPITR DRHEAMLLQL AERRSQV
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