Gene Synpcc7942_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0558 
Symbol 
ID3774796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp539683 
End bp540297 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content59% 
IMG OID637798966 
Producthypothetical protein 
Protein accessionYP_399577 
Protein GI81299369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.318144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.526265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACC AAACTCCTTA CGAACGGCTG GGTGTTGCAG AATCCGCCTC TTTTGATGAA 
ATTCAAGCAA CCCGCGATCG CCGGCTGGCA GAACTAGAAC CCGATTCACC GCAGCGGACT
GCCATCGAGA CCGCCTACGA CGCCATTCTG ATGGAGCGCT TGCGGCTACG CCAAGAAGGC
AAGATCAAGG TGCCGGAGCG GATTCGCTTT GCCGAAAAGC CGATCGTAGA GTCCAAGAAA
ACACCGACGT TCCCGACACC CTCGGCACCA GCCTGGGCGG GTCGCTTTTT TGATAAACCT
CAGCCGCAGG AGTTGTTGAT CAGCTCGCTG CTCTTTGGCG GGCTGCTGGT GGTGTCGCTC
TTCCCGCGCC TACAACCCAC TATTCTGCAA CTGCTGCTGG TGGCCGGGAT TGGCAGTGCA
ATTTGGCTGG TGATGCGTAA AGAGAACCAC TTTGGGCGGG CTGCTCTCTT CTCTTTTGCG
GCGTTGCTAG TGGGGCTGCT CGCCGGTACC GCGATCGCGG GACTCATTCC TGTTCTTGGC
CCGCTCAGCC CCGAGCAGAT TGCCACAGCC TTTGCCCTGC TGTTGCTCTG GGCGATCGCC
ACCTTTCTGC ACTGA
 
Protein sequence
MADQTPYERL GVAESASFDE IQATRDRRLA ELEPDSPQRT AIETAYDAIL MERLRLRQEG 
KIKVPERIRF AEKPIVESKK TPTFPTPSAP AWAGRFFDKP QPQELLISSL LFGGLLVVSL
FPRLQPTILQ LLLVAGIGSA IWLVMRKENH FGRAALFSFA ALLVGLLAGT AIAGLIPVLG
PLSPEQIATA FALLLLWAIA TFLH