| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0556 |
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| Symbol | |
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| ID | 3774794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 538506 |
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| End bp | 539219 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637798964 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_399575 |
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| Protein GI | 81299367 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.451756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACAG CCAAAATTTT GGTCGTGGAT GATGACAGCG CGGTCCGAAC TTTGTTAGTG
CGCTTTCTAT CGCGCCAAGG CTATCAGGTA GAAGCCGCAA TCGATGGCAG CAGTGCCTTG
GCTCAGTTCG AGCGCTTTAG CCCAGATTTG TTGATTCTGG ACGTTAACCT GCCGGATACC
AACGGCTATC AACTCTGCGA GATTGTTCAG AAACGCACAG GCGTCTACGT CATTTTGCTG
ACCAGTCGCG ATGATGAGGC CGATATTCTG ACCGGCTTTG CTAAAGGCGC GGACGACTAC
ATCACCAAGC CGTTTTCGCT GATGAGTGTG GGGGCGCGGA TCGCGGCGAT TTTACGACGG
CAGCGCCATA TCGAAACTGC CAGCCAGCCA GCGCTGCACT ACGAGCAATT GCAGATTGAT
CCGGCCCGGC GCGAGGTCTC ATTTGCAGGC CAACCCATCC TGTTGACAGC CTTGGAGTTT
GATCTGTTGC ACTTTCTGGC AACGCATCCC GATCGCGTTT GGCGGCGCAA TGAGTTGATT
CAGGAAGTTT GGGAATACGA TTACGTCGGC GATCAGCGCG TGGTCGATGT ACACATTGGT
CAAATCCGCA AAAAGCTTGA GGTCAATCCC GAGCTGGCTT GTCCAATTCA AACGGTGCGC
GGGGTGGGCT ACAAGTTTGA GTCAACAGGA ATGAGCCTTT CGCGACTGGC CTAG
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| Protein sequence | METAKILVVD DDSAVRTLLV RFLSRQGYQV EAAIDGSSAL AQFERFSPDL LILDVNLPDT
NGYQLCEIVQ KRTGVYVILL TSRDDEADIL TGFAKGADDY ITKPFSLMSV GARIAAILRR
QRHIETASQP ALHYEQLQID PARREVSFAG QPILLTALEF DLLHFLATHP DRVWRRNELI
QEVWEYDYVG DQRVVDVHIG QIRKKLEVNP ELACPIQTVR GVGYKFESTG MSLSRLA
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