Gene Synpcc7942_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0548 
Symbol 
ID3774786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp530623 
End bp531783 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content60% 
IMG OID637798956 
Producthypothetical protein 
Protein accessionYP_399567 
Protein GI81299359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAA CCGGAACCGC GATCGCTGTC CAAGTCCGTC ATCAAACTGC TATGGACGCT 
GACTTCGCAC ACCGCAATCA TCCACTGGCG TTGGCAACGG CTGTCCAAAC CCGTTTACAG
GTCTACCAAC AGCTACGCCA GCAGTATCCC AATGCCAGCC TGACGGCAGA GCTTGTGAGT
GTGCAGGGCG AGCAATTTGT GGTGCGTGCC CAGGTCGAAA TTGGTGGGCA AACCCTTGCA
ACAGGCTTAG GGGCAGCTAC TCAAATCGAA GAAGCGGAGG ATCGCGCCCG CCTGCGAGTC
TTGGAGCTGT TGGGGCTCAG TCCCGAATGC AGCGCTCCAA CCCAATGGGA AGTCCAAGTT
GTGGCTCAGG CTACGCCAGC ACTGGCAGCT CCCGCCAACG ATCGCGCCCT CGCAGCGGTC
AGTACACCGA TCGCTGCGAC TCCTCCGGCG ATCGCCCCGG AGCTGGAACC AGAAATCCCA
GCCTTCGATG AGGTCGAGGC AGAACCAGAA CTGCCGTCAG AACCCCGCGT TACTCAAACA
GCCCTGCCAG AACGCGATCG CCCTAGACCG GCACAACCGG CAGCTGTGAC CGCTGAATTG
CCATTGCTTG AGCAGCCGCC TGCACCCACT GCGAGCCTGT CTGCAGTGCC CACCGACTGG
TCGGAAGATC TGGCAGAGAT TGAAGTCGAA CTTAAACGAC TGATGTGGAG CGAAGCCGAA
GAGCAAGCCT ATCTGCTGCA ACACTTTGGC AAGCGATCGC GCGCGCTGAT TGCTGACTAC
GATCAGTTAC TGCTCTTTCT GGATCATTTG CGATCGCTGC CAACCCCAGG GCTCTCCCCG
AAACCGACGA TCGCTCTAGA ACCGGAACCG AAAGCGGCTC CAACGGTCTC CTTGCCACCC
TTACCGGAGC CGACGGTGAT ACCGACCCCT GCACCGGCGA TCGCTCCGCC AGTTGAGCAG
CCGAATCGCA GCGAAGCCAT GGAACTGACC AGTGCGGCCG TGAAACGACT GGGTTGGACC
AATCGCCAAG GTAGTGATCA TCTGCGGCAG ACCTACGGCA AGGCCAGTCG CCAGCAGTTG
ACGACTGAGG AACTCCTCGA CTTTTTGCAT TATTTGCACC GGCTGTCGCC ACCCCCCAGC
AGCGAAGCCG TGCCGTTTTA A
 
Protein sequence
MNPTGTAIAV QVRHQTAMDA DFAHRNHPLA LATAVQTRLQ VYQQLRQQYP NASLTAELVS 
VQGEQFVVRA QVEIGGQTLA TGLGAATQIE EAEDRARLRV LELLGLSPEC SAPTQWEVQV
VAQATPALAA PANDRALAAV STPIAATPPA IAPELEPEIP AFDEVEAEPE LPSEPRVTQT
ALPERDRPRP AQPAAVTAEL PLLEQPPAPT ASLSAVPTDW SEDLAEIEVE LKRLMWSEAE
EQAYLLQHFG KRSRALIADY DQLLLFLDHL RSLPTPGLSP KPTIALEPEP KAAPTVSLPP
LPEPTVIPTP APAIAPPVEQ PNRSEAMELT SAAVKRLGWT NRQGSDHLRQ TYGKASRQQL
TTEELLDFLH YLHRLSPPPS SEAVPF