Gene Synpcc7942_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0535 
Symbol 
ID3774773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp519088 
End bp519333 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content57% 
IMG OID637798943 
Productphotosystem I subunit VII 
Protein accessionYP_399554 
Protein GI81299346 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR03048] photosystem I iron-sulfur protein PsaC 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.966086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATT CGGTCAAGAT TTACGACACT TGCATCGGCT GCACCCAGTG CGTGCGGGCG 
TGCCCTCTCG ATGTACTGGA AATGGTGCCC TGGGACGGCT GTAAAGCCGG TCAGATCGCT
GCTTCTCCGC GAACCGAAGA TTGTGTGGGC TGTAAGCGTT GCGAAACGGC TTGCCCCACG
GACTTTTTGA GCATTCGGGT CTACCTGGGT GCCGAAACGA CGCGCAGCAT GGGTCTGGCT
TACTAA
 
Protein sequence
MSHSVKIYDT CIGCTQCVRA CPLDVLEMVP WDGCKAGQIA ASPRTEDCVG CKRCETACPT 
DFLSIRVYLG AETTRSMGLA Y