Gene Synpcc7942_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0530 
Symbol 
ID3774768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp514335 
End bp515288 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content59% 
IMG OID637798938 
Product4Fe-4S cluster binding 
Protein accessionYP_399549 
Protein GI81299341 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.347974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAA CGCTTGCAGA GCAGATTAAG GCCGAAGCGA TCGCCCTCGG CTTTGACAAA 
GTCGGGATTG CGAGCGTCGA TCCACCCGAT ACGGAAGCCT TGGCTGCACT CGATCGCTGG
TTGGCCCAGG GCTATCAAGC GGAAATGGAC TGGATGGCCA GCGATCGCCG GCGGGATGTG
CGGAATTTGC TGCCCAATGC GCAGTCCGTG ATTTGTGTCG CGCTGAACTA CTACAGCGGC
GATCATCCTG ACCCGTCGCC TGAAGTGGGC AAAATTGCTC GCTATGCTTG GGGGCGCGAC
TATCACCGCG TGGTCGAAAA GCGACTGAAA GCCCTCGCCC GTTGGCTGCA AACTCAGCAG
CCGGACTGCG AATGTCGCTG GTACGTCGAT AGTGGCCCGA TCGCAGATAA AGTCTGGGCG
CAACGAGCTG GCCTAGGTTG GATCGCCAAA AATAGCAATG TCATCAGTCG CGAGTTTGGT
TCCTGGATTT TTCTGGGGGA ACTGGTGACG ACTTTGGCGT TGCCCGCTGA TCGTCCGCAC
ACAGCCCATT GCGGCAGTTG CAGCCGATGT CTAGAGGCTT GCCCGACCCA AGCGATCGTG
GAGCCTTATG TGGTTGATGC CAATCGCTGC ATTGCGTATC ACACGATCGA GAACCGAGCG
GCAGACTTGC CCGCCGCGAT CGCCCAGAAT CTCCAAGGTT GGGTGGCGGG CTGTGATATC
TGCCAAGAGG TTTGCCCTTG GAATCAACGC TTTGCCCAAA TAACCACCCT TCCGGATCTC
CAGCCGCGAT CGGAGTTGCT GGCTCCTGCC CTAGCGGAGT TGGCGACTCT CTCGGAGGAA
GCCTGGGATC AGCAGTTCCA AGGGTCGGCG CTGCGTCGCA TTAAACCCGC CATGTGGCGG
CGCAATAGCC GGGCCAACCT GCGCCAGCAG TCTGAAGGGA ATCGGCTAAG CTAG
 
Protein sequence
MVATLAEQIK AEAIALGFDK VGIASVDPPD TEALAALDRW LAQGYQAEMD WMASDRRRDV 
RNLLPNAQSV ICVALNYYSG DHPDPSPEVG KIARYAWGRD YHRVVEKRLK ALARWLQTQQ
PDCECRWYVD SGPIADKVWA QRAGLGWIAK NSNVISREFG SWIFLGELVT TLALPADRPH
TAHCGSCSRC LEACPTQAIV EPYVVDANRC IAYHTIENRA ADLPAAIAQN LQGWVAGCDI
CQEVCPWNQR FAQITTLPDL QPRSELLAPA LAELATLSEE AWDQQFQGSA LRRIKPAMWR
RNSRANLRQQ SEGNRLS