Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0517 |
Symbol | |
ID | 3774754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 502006 |
End bp | 504333 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637798924 |
Product | exonuclease RecJ |
Protein accession | YP_399536 |
Protein GI | 81299328 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGGA CCTGGCGATC GCCCCAAGTG TTCCAACTGC CAGCAGGCTG GCTTCAGCAG GTTCAGCAAG CTTATCCCCA TGACTACGCC GAGGTGCTGG CCCAGCTGAT TTGGCAACGA CAACTGGCCA CCCCGGCATC TCTCGCTGGC TTTCTCAATC CCGATCGCTA TTTACCCACC GGCCCTGAGG CGTTTGGGGT CGAAATGGAT GGGGCGATCG CGCGACTCTT ACAGGCCCAC GCGAATCCTG ACGATCGCCT CTTGATCTGG GGGGATTTTG ACGCCGACGG GCTGACCGCC ACAGCAGTGC TCTGGGAAGG ACTGGGTCAA TACTTTCCCC AGACAGAGCG TCTGTTTTGG ACGATTCCCG ATCGCCTCCA GCAATCCCAT GGGTTGAACC TTGAGGGACT GGAGCAGGCG ATCGCCAACG GCATCACCTT AGTGATTACC TGCGATACCG GCTGTAGTGA TGCGGAGCTG CTGCAATGGG CCAGCGATCG CGGCTTGGAT GTAATTGTCA CGGATCACCA CACGTTACTC CCTGAACGGC CACCGGTTAC GGCGCTGATC AATCCCCGTC AGTTGCCGAC TGACCATCCC CTCGCCACTC TCTCCGGCGT TGCGGTCGCC TACAAATTAA TAGAAGCGCT CTATCAAGCT CTCCCCCTAG CGACAGCACA ACCCTTGGAG CATCTGCTGG ATTTAGTCGC GATCGGTCTG ATTGCCGATT TAGTCGACCT GCGGGGGGAC TGTCGCTATT TGGCGCAGCG AGGCTTGCAG CAATTACAGC AACTGGCCCA AGTCCGGCCC CAAGCCAGTC GTCGTCCCGG CATCACCGAA CTCCTGAATC GCTGCCGGGG TAGCGGCGAT CGCCCGACTG ACATCCGCTT TGGTCTGGGG CCACGACTCA ATGCTGTCAG CCGCCTCCAG GGCAAGGCCG ATCTGGCACT GCAACTCCTG ACCAGCCGCG ATCCAACCGC CGCTCGACGA TTGGCCCAAC AGGTCGAGGA GCTGAACCAA CGGCGGCAGC GCTTACAGCG TGACCTGCTG CGGGAATTAG AACCCCAAAT TCAGCAACAG CGCGATCGCG CCGCTCTCGT CCTAGTCGGC GAGGGCTGGC ACGGCGGCCT CCTAGGGCTG GTGGCCAGTC AGGTTGCCCA TCGAGAAGAC AAACCGACCT TAGTTCTCAG TCTGGATCCC CCCAAGACTC AACCGCGATT GGCCCGTGGC TCGGCCCGAT CGATCACCGG CCTCAATCTC TATGAACTGC TCGCCAACCA GCGATCGCTA CTGCTCCGTT TTGGCGGTCA TCCGCAAGCA GCGGGACTGA CCCTGATCGA TGAGCATCTA CCCCTGCTCA GAGAAGCCCT CGAACAACGG CTCCAGCAGT ATCCGCCCGA TCGCAGCCAA GCGGCGATCG CGCCAGAGCT GACGGTGAGC GTAGCGGATC TCGATCGCCC CCTATTTCGC GCCCTCTATG CGCTGGAGCC TTGCGATCGC CTGCCGCAAT TGGAAGTTCG GCGCTGTCGC TTGCAACGGC AGTGGCAAAA TTCTGTCGGT TCCGGCCCTT ATCGCCGTCA GTACTGGACC TTTCAGATCA CCGATGACCG TGGCGCGATC GCCCAGGGAC AATACTGGCC CGAGAGCAAT GCCGAGACCT TACCCCCCGA GGGCGATCGC TGCGACCTCG TGATCGAGCT CGATCTCCGC AGCGCTGCCG GGGATCAAAA CCGGAAGGAA CTGGTTGCCC GTCTGCTGGC TTGGCGATTA CCGCAGTCAG AGTCAGCGAT TCCTATGCCT GACTTGCTGG ATTGGCGATC GCAGCTGCCG GATCCAGCGA TCGCAGCTCA TATCCTCACG ACTTGTCCTT GGAGCTGGGA AGAACTCGCC AGCCACTGGC AACAGGCGCT GCGATTGCAA CAACCATTAG CGCTGGCTTA CCCGCACCCC GAAGCTGAGA GTCTGGAACG AGGATGGCGG CAATGGCTGG GAATCCTGAC GGCCCTAGCC CAGCGATCGC AACCTGTCCC TTGGCCTCAA CTCAGTGATC ACCTGGGCTG GCCCACGGCT TTGATCAGCA CTGGTTTACA AGTCTGTCAG CCCTTGGGTT ATCACTGGCA AGCCAGTGCA GAAGGACTAT TACTTATTTG GCCGGACCGG GCACAGTTGG CTTGGCAAAG CCCCCACCTC CAACAAACCC ATCAGCAATG GCAGCGACTC CTGCGAGAAT GGCAGAGACG GCGACAGTTC TTTGCTGAGG CTTCCCTCAA GACGCTAGCC GCAGGCCTAA ACGATCGCTA TAATCTCCGC ACTTCCGAGC CGGCCTAG
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Protein sequence | MQRTWRSPQV FQLPAGWLQQ VQQAYPHDYA EVLAQLIWQR QLATPASLAG FLNPDRYLPT GPEAFGVEMD GAIARLLQAH ANPDDRLLIW GDFDADGLTA TAVLWEGLGQ YFPQTERLFW TIPDRLQQSH GLNLEGLEQA IANGITLVIT CDTGCSDAEL LQWASDRGLD VIVTDHHTLL PERPPVTALI NPRQLPTDHP LATLSGVAVA YKLIEALYQA LPLATAQPLE HLLDLVAIGL IADLVDLRGD CRYLAQRGLQ QLQQLAQVRP QASRRPGITE LLNRCRGSGD RPTDIRFGLG PRLNAVSRLQ GKADLALQLL TSRDPTAARR LAQQVEELNQ RRQRLQRDLL RELEPQIQQQ RDRAALVLVG EGWHGGLLGL VASQVAHRED KPTLVLSLDP PKTQPRLARG SARSITGLNL YELLANQRSL LLRFGGHPQA AGLTLIDEHL PLLREALEQR LQQYPPDRSQ AAIAPELTVS VADLDRPLFR ALYALEPCDR LPQLEVRRCR LQRQWQNSVG SGPYRRQYWT FQITDDRGAI AQGQYWPESN AETLPPEGDR CDLVIELDLR SAAGDQNRKE LVARLLAWRL PQSESAIPMP DLLDWRSQLP DPAIAAHILT TCPWSWEELA SHWQQALRLQ QPLALAYPHP EAESLERGWR QWLGILTALA QRSQPVPWPQ LSDHLGWPTA LISTGLQVCQ PLGYHWQASA EGLLLIWPDR AQLAWQSPHL QQTHQQWQRL LREWQRRRQF FAEASLKTLA AGLNDRYNLR TSEPA
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