Gene Synpcc7942_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0495 
Symbol 
ID3774733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp482981 
End bp483517 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID637798902 
Producthypothetical protein 
Protein accessionYP_399514 
Protein GI81299306 
COG category 
COG ID 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.336133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGA AACCCACAAC ACACAGGACA AATAACCAGA CACGATCGCA ACAAACTCGC 
CAGTCAACCG GGCGATCGGG ACCATCTGGG CTGGAAGCGA TCGCTCCACC TGCTATGGCG
ACTTATATCT ATCGGTTACA CCCCCGCGAT CGCATTAATC TAATTCGACG GGGAGTTCCC
GCCACTTTGG TTGTGCAAAC GGAGCAACAA CTAGGGCTAG CCAGACAAGG CGTTTGCCAG
ATGTTGGGGC TATCAGTCTC AACGATCAAG CGGCGTCTGA CTCAAAATCA GGCGTTGACT
GCGGATGAGA CCGAGCGATT GCTAGCGCTG CAGCAGTTGA TTGGTCAGGT CGAGGCGATC
ATTGCAGAAG CGGGCGAGCC CAGTGGATTT GATGCGGCGC AGTGGGTTGG GGAATGGCTG
ATGACGCCGA ATCCGGCCCT GGCGGGGCAA AAGCCAGCGG AATACATGGA TACGGCTGAG
GGACGGCGGC TGGTTTCGCA GGCGATCGCC ATGATGCGCA GCGGAGCTTA TGCGTGA
 
Protein sequence
MKTKPTTHRT NNQTRSQQTR QSTGRSGPSG LEAIAPPAMA TYIYRLHPRD RINLIRRGVP 
ATLVVQTEQQ LGLARQGVCQ MLGLSVSTIK RRLTQNQALT ADETERLLAL QQLIGQVEAI
IAEAGEPSGF DAAQWVGEWL MTPNPALAGQ KPAEYMDTAE GRRLVSQAIA MMRSGAYA