| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0490 |
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| Symbol | |
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| ID | 3774728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 477395 |
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| End bp | 479440 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637798897 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_399509 |
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| Protein GI | 81299301 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.853397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.203863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGAT GGTGTCGACC CTTGAAAATT CTTCGCTGGA AGATCTATAG GTATCGTTAC
TTACTCTGTT TGCTAACTAG TCAGGTTGCT ATTTTAGGGC TGGATTTTTA TCTTTCAGCT
GCTATTAGTT TACAGCCCTA CTATTGGGTT CCTGTAGTTT TAAGTATTCT TTTTGTCTCG
CCTCGACAAG TTTTTTTGCT GAGTGCTCTT GCTTTCGCTT TCACAGTTTT AGCAGGATTT
TACTGGGGAT ATTTTCTGTC TGCTGATTAT CTTTCTGTTG TATTGTCAAC CATTGTTGTC
TCGACAATCT CTGTCCTGAT TTCAATCCGT ATTCAACGCA GTATAAAAGT TCAAAAAAAC
CTTGAGGAAC GCTACCGATT ACTGGCTGAA AATGCTTCAG ATATTGTGAT TTTTGCTCAG
CCTGATCACT GTATTCGCTG GGTTTCACCT TCTTTGCAAT CGGTCTTAGA TTGGGGCTTG
GAAGATTGGA TAGGCTCAAG AGTCGCTAGC TTTATCCATT CTCAAGATCG TTTCATACTA
GAGACACTGT ATGCTAAGGC TATTTTCCCT GAAGAAAATA CAACTAAACA TGAACAGTCA
ATACGCATAA GGCATAAAAA TGGTGATTAT CGCTGGTTTT CAATTCGTGT TGCAGCTGTG
AAGGATGAAG CAGGACAGCC TATAGGATTT GTCAAAGGTT TTCGGGATAT TCATGATCAG
GTGCGATCGC AACAAGCATT GAGAGAGGAG CGAGCGCAAC TTAGAGCTGT AATGGATTCA
CTGATTGATC CTCATGTTTT ACTAACTGCG ATTTGGGATG ACAAGGGTAA TATTGTCGAT
TTTCGCTACA CAGATGCCAA CCCTGCGGCA TGCCTTTATA ACCAAATGAC TCGTGAGCAA
CTCATTGGGA AGACACTGCT TGAAATCCTA CCTGCTCACA AGGCCAGCGG TTTGCTGGAT
CATTACATAC AGACGATGCA AAGTTTTGAG CCATTAATTC TCAATGACTA TGCTTATCCC
CATGATATTT ATAACGAAGA GCGTCGCTTT GATATTCGGG CTGTCCGAGT CGATAATGCG
TTGAGCTATA CATGGCGCGA TGTGACCGAT CGCTACCAGG CAGCACAACA GCTTGCTGAG
TCTAAGGAGC GTTACCAGCA GCTAGCACAG CGTTGGGAGT TTGCTATGGG TGCAGGTGAT
ATTGCTATTT ATGAAGCTGA TTTAAGAACA CAAACTGCTT TTTACTCGCC AGGATTGCTC
AAGCAACTTG GTTATCAAGA GGGAGATTGG TCTGACAGGC TTGATGAATG GTGGCAGCGT
CTTCATCCTG AAGACATCCT CTTGATAGAA CAGAATCTTA AGGTCAACTT TACTGATCAA
AGTCAACCTA ATTACACCAC AGAATATCGA ATTCAACATC GAGATGGTTC TTATCGTTGG
ATTCTCGATC GTGGCAAAGT CATGTCCTAC GATGATGAGG GTCGACCATT GAGCGTTATG
GGTGTTAATG TCGATATCAC TAGTCAAAAA TATACTGAAC AAGAGTTGTC ACGTCAGGCA
AAAACGGATG AATTAACAGG ACTCATTAAT CGTCGAGAAG CGATCGCCCG GATTCAAGCC
CTTTGTGCTC TCGATCGCCG TCATGGGAAA GAATTTGCTG TTCTATTTTG TGACCTAGAT
TGCTTCAAAG ATGTCAACGA TCACTTTGGT CATCTTGCTG GTGATACAGT CCTTCAAGTT
GTGGCAAGAC GGATCAAGTT AGCGATTCGT AGCAATGATT TTGCAGCACG GATTGGTGGT
GATGAATTTC TAGTCGTTTT GCAAGGTGTT CACTCGCTCA AAAATGCAGT AGTGATCGCG
GAGAAGTTGC GTTATGTGGT TGCTCAGCCT ATTTCTACAG ACGCAGGATG TGTAGCTCAG
ACCATGACGA TTGGTGTCAC GCTGATTCAG CCTGCCGAAA CGATTGATAC ACTCATCGCT
CGGGCTGATG CGGCGATGTA TCAAGGTAAA CAATCCGGCC GCGATCGCGT TATCCCCTTT
GCCTAA
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| Protein sequence | MAGWCRPLKI LRWKIYRYRY LLCLLTSQVA ILGLDFYLSA AISLQPYYWV PVVLSILFVS
PRQVFLLSAL AFAFTVLAGF YWGYFLSADY LSVVLSTIVV STISVLISIR IQRSIKVQKN
LEERYRLLAE NASDIVIFAQ PDHCIRWVSP SLQSVLDWGL EDWIGSRVAS FIHSQDRFIL
ETLYAKAIFP EENTTKHEQS IRIRHKNGDY RWFSIRVAAV KDEAGQPIGF VKGFRDIHDQ
VRSQQALREE RAQLRAVMDS LIDPHVLLTA IWDDKGNIVD FRYTDANPAA CLYNQMTREQ
LIGKTLLEIL PAHKASGLLD HYIQTMQSFE PLILNDYAYP HDIYNEERRF DIRAVRVDNA
LSYTWRDVTD RYQAAQQLAE SKERYQQLAQ RWEFAMGAGD IAIYEADLRT QTAFYSPGLL
KQLGYQEGDW SDRLDEWWQR LHPEDILLIE QNLKVNFTDQ SQPNYTTEYR IQHRDGSYRW
ILDRGKVMSY DDEGRPLSVM GVNVDITSQK YTEQELSRQA KTDELTGLIN RREAIARIQA
LCALDRRHGK EFAVLFCDLD CFKDVNDHFG HLAGDTVLQV VARRIKLAIR SNDFAARIGG
DEFLVVLQGV HSLKNAVVIA EKLRYVVAQP ISTDAGCVAQ TMTIGVTLIQ PAETIDTLIA
RADAAMYQGK QSGRDRVIPF A
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