Gene Synpcc7942_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0422 
Symbol 
ID3773367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp412147 
End bp413289 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content55% 
IMG OID637798828 
Producthypothetical protein 
Protein accessionYP_399441 
Protein GI81299233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC GGATTACAGC CCTAACAACA GCGGCCCTAC TCTGGGGAAG TGCGATCGCA 
GTCCTGCCCC CTGAGGCCGT GCAGGCCGCC GAGGTCAATC CCACCCTCCT GCGTCGCTGT
CAAAGCGCTT TAGCGGAGCG GATTGGCCAA CGCATTCAAG TTCAAACTGA TACGCTTTCT
TCCTACTTCA TTTCTAATGC CGAGCAGGGA ATTCGAGGCC GAGGGAATCT CGACAGCAGT
GGCAACTTTC GGCCTTTTCA ATTTGATTGC CAGCTGAATA CGCGGGATGG CCGGGTTGTT
AGCTTGGAAT ATAACTATCA ATCGGCTGGG AATGATGACA CAGTCAGCGA CAGCTTAAGG
CGGAGTTGCC AAGAGGCCCT TGCCAATCGC ATTGGGCAGC GAATTCTGCT CAGCGCTGAT
ACGCTACGTG CTTACCCAAT CTCGAGGAAT GAACAGGGCG TAAGCGGAGA AGGCACCCTC
GATCGCTCTG GTAACTTTCG GCCCTTCACC TTTGACTGCC AGGTCAATCT CCGCAATGGC
CGCGTTAAGC GCATTAGCTA TGACTATCAA GCAGAAAACA ATCCCCCAGA GATCAGTCCA
GCCTTAGTTC AAGCCTGCCA AGCGGAACTC CGCAATCGTC TGAGCCCTCA AGTGCGCCTC
CAGCAAGCGA GTCTCCGCTC TTACTTCATC TCCAATGCGG AGCAAGGACT GCGGGGTGAT
GCCGTCCTTG ATCGCAACAG CCAACCTTTT CGCTTTGATT GCCAAGCAAA TCTGCGGACT
GGCCAAATTA CGCGCCTCGA CTACGACAGT GCTGGAGCGA TCGCTGAGCT CACGCCGATC
TTCACCAACT TCCAAGATGG TGATCGCGTT ACCAGTAACG GTTTTGTTGT GATGGGTCGT
ACGCGTCCTA ATGCCCGTGT GCGGATTGAA GTCCGATCGA GTGCAGCGGT CTTGGGTGGA
CTGATTGACA TTGGCAACAC TGTCTTACTC GATCGCGAAG TCATTGCCGA TCGCGATGGC
AACTTCTCTG TCCAAGTCCG GCGTCCAGTC GTGGTTTCCA GTAGCACTCG CTATGTGGTG
CGAGCCAGTG CCAGCCTGAA TGGTGAAACT CGCCAGAATG AGATTGTGCT GCGGCAGCAA
TAG
 
Protein sequence
MTQRITALTT AALLWGSAIA VLPPEAVQAA EVNPTLLRRC QSALAERIGQ RIQVQTDTLS 
SYFISNAEQG IRGRGNLDSS GNFRPFQFDC QLNTRDGRVV SLEYNYQSAG NDDTVSDSLR
RSCQEALANR IGQRILLSAD TLRAYPISRN EQGVSGEGTL DRSGNFRPFT FDCQVNLRNG
RVKRISYDYQ AENNPPEISP ALVQACQAEL RNRLSPQVRL QQASLRSYFI SNAEQGLRGD
AVLDRNSQPF RFDCQANLRT GQITRLDYDS AGAIAELTPI FTNFQDGDRV TSNGFVVMGR
TRPNARVRIE VRSSAAVLGG LIDIGNTVLL DREVIADRDG NFSVQVRRPV VVSSSTRYVV
RASASLNGET RQNEIVLRQQ