Gene Synpcc7942_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0285 
Symbol 
ID3773847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp281054 
End bp281395 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content57% 
IMG OID637798691 
Productcarbon dioxide concentrating mechanism protein CcmK 
Protein accessionYP_399304 
Protein GI81299096 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGC AGGCAATTGG CTCGCTGGAA ACGAAGGGCT TTCCCCCAAT CTTGGCGGCA 
GCTGATGCCA TGGTCAAAGC TGGCCGAATC ACGATTGTGA GCTACATGCG GGCCGGTAGC
GCTCGCTTTG CAGTCAACAT TCGGGGGGAT GTCTCAGAAG TCAAAACGGC GATGGATGCG
GGCATTGAAG CCGCGAAAAA TACGCCTGGT GGCACCCTCG AAACGTGGGT GATCATCCCT
CGCCCGCATG AAAACGTGGA AGCGGTCTTC CCGATCGGCT TTGGCCCAGA AGTGGAACAA
TATCGACTCT CTGCCGAAGG AACTGGTAGT GGCCGCCGTT AA
 
Protein sequence
MSQQAIGSLE TKGFPPILAA ADAMVKAGRI TIVSYMRAGS ARFAVNIRGD VSEVKTAMDA 
GIEAAKNTPG GTLETWVIIP RPHENVEAVF PIGFGPEVEQ YRLSAEGTGS GRR