Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0285 |
Symbol | |
ID | 3773847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 281054 |
End bp | 281395 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637798691 |
Product | carbon dioxide concentrating mechanism protein CcmK |
Protein accession | YP_399304 |
Protein GI | 81299096 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAGC AGGCAATTGG CTCGCTGGAA ACGAAGGGCT TTCCCCCAAT CTTGGCGGCA GCTGATGCCA TGGTCAAAGC TGGCCGAATC ACGATTGTGA GCTACATGCG GGCCGGTAGC GCTCGCTTTG CAGTCAACAT TCGGGGGGAT GTCTCAGAAG TCAAAACGGC GATGGATGCG GGCATTGAAG CCGCGAAAAA TACGCCTGGT GGCACCCTCG AAACGTGGGT GATCATCCCT CGCCCGCATG AAAACGTGGA AGCGGTCTTC CCGATCGGCT TTGGCCCAGA AGTGGAACAA TATCGACTCT CTGCCGAAGG AACTGGTAGT GGCCGCCGTT AA
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Protein sequence | MSQQAIGSLE TKGFPPILAA ADAMVKAGRI TIVSYMRAGS ARFAVNIRGD VSEVKTAMDA GIEAAKNTPG GTLETWVIIP RPHENVEAVF PIGFGPEVEQ YRLSAEGTGS GRR
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