Gene Synpcc7942_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0152 
SymbolmraY 
ID3773492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp154914 
End bp156011 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content58% 
IMG OID637798558 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_399171 
Protein GI81298963 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0757073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTGGG GACAGGCGCT CCGCAACTAC AAGCCCACCG GCCAGCAGCT GTTTTTCAGC 
CTAACCGCTC TCTTGGCGGC TGCGGTTTGG GGTCGCGATC GTCAGTTAGA CATTGGGCTG
TTCAGCCCCC AAAGTCAATT GCTGGCTTTG GGGTTGGGTT TTAGCCTCGC GGCGATCGCC
GGCTACTGGG TCGTGCCGCT GCTTCGTCGC ATCAAGGCAG GGCAATTTAT TCGCGAAGAT
GGGCCGCAGT CCCATTTGCA AAAAGCCGGA ACCCCGACCA TGGGAGGCAT TTTTGCGATT
CCTGCTGGCC TCTTGCCTGC CCTGATTCTG GCGGGGCGAT CGCCCCTAGT GTGGGCGCTG
GCGTTCGTGA CGCTGGCCTA TGCCACGATC GGTTGGCTGG ATGACTGGCA AATTCTGCGG
CATCGCAACA ACAAAGGAAT TTCTCCCAAG CTCAAGCTCT GCCTGCAGTT TGGGGCTGCC
TTCCTCTTCT GCCTATGGCT GATCAGCCAG CAGGGTTGGC AAGGCACAAT CACGACGATC
ACTCTGCCCT TTGGCTGGAG TTTAGCCCTC AGTCTGCTGT TCTGGCCCTT GGCCGTCTTC
ACCTTGGTGT CCGAGAGCAA TGCGACCAAC CTGACCGATG GGTTGGATGG GCTAGCAGGG
GGAACAGGTG CCGCTGTCCT TGCTGGCTTG GGTCTCTGGC TGGCACCTCA AGACCCGGCG
ATCGCGACCT TCTGCTGCAG TTTGGCTGGG GGCTTCCTCG GCTTTCTCCT CCACAATCGC
AACCCAGCCC GTGTCTTCAT GGGTGATACC GGATCTCTCG CTTTGGGCGG GGCGATCGCC
GCGATCGCGA TCGTGGCTAA CTGCCTCTGG GTGCTGTTGG TGATGGGCGG CTTATTTGTC
TTGGAATCGA TCTCCGTCAT ACTCCAAGTC AGCTACTACA AAGCCACCAA AGGGCCTGAT
GGCAAAGGTA AGCGCTTATT GCGCATGGCT CCTTGGCACC ATCATCTCGA ACTGGGGGGC
TGGAGCGAGA CACAGGTGGT CGCCAGTTTT TATGGCTTGA CGCTGCTGTT GATTGCCAGT
TGTTGGCTCT TAAACTAG
 
Protein sequence
MSWGQALRNY KPTGQQLFFS LTALLAAAVW GRDRQLDIGL FSPQSQLLAL GLGFSLAAIA 
GYWVVPLLRR IKAGQFIRED GPQSHLQKAG TPTMGGIFAI PAGLLPALIL AGRSPLVWAL
AFVTLAYATI GWLDDWQILR HRNNKGISPK LKLCLQFGAA FLFCLWLISQ QGWQGTITTI
TLPFGWSLAL SLLFWPLAVF TLVSESNATN LTDGLDGLAG GTGAAVLAGL GLWLAPQDPA
IATFCCSLAG GFLGFLLHNR NPARVFMGDT GSLALGGAIA AIAIVANCLW VLLVMGGLFV
LESISVILQV SYYKATKGPD GKGKRLLRMA PWHHHLELGG WSETQVVASF YGLTLLLIAS
CWLLN