Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0115 |
Symbol | |
ID | 3773455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 113631 |
End bp | 114146 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637798521 |
Product | hypothetical protein |
Protein accession | YP_399134 |
Protein GI | 81298926 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0764821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTAG TTCGACAAGT TGAAGTTCTT CCCGTCGAAA GCTTTCGTAG CGGTACTGCT CAGTTTTTTG CGCCCCAAAC CTGCGATCAA ACCATGGTGG TTGAGCTCGG TGCAGAGCAG GTGGAAGACT TATTTGTCCA TCACTTCCAA ACCGACCAAC TAATGGTGCT ACAGGGTCAG TTCGTTCTAG TCGTGCTAGA AAATCGGCGC TATCGCTATC TACCCCTGAG CGATCGCAAA CGGGAAGTGG TGCGGATTCC GCCGGGGATT CCCCACGGAG CAGTCAATCT CAGTGGCGAA CCTTGCCTAC TAGTCAATGC GGTTATTCGC CATGGGGAAC CGTGCGATCG CGATTATCGA CCGCTGCAGC CTCCCCTGCC CTACGACTGG GCAGCCATTC AGCAGGCATT GCAGAGCCTG CGATCGCCGC GCCAGCCGCA ACCACTACCT AGACAAAGGA ATCGAGATCA AGGGACTTCA GGCCACCTTG CTCAATCTGG CGCATCACAT TCGTAA
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Protein sequence | MALVRQVEVL PVESFRSGTA QFFAPQTCDQ TMVVELGAEQ VEDLFVHHFQ TDQLMVLQGQ FVLVVLENRR YRYLPLSDRK REVVRIPPGI PHGAVNLSGE PCLLVNAVIR HGEPCDRDYR PLQPPLPYDW AAIQQALQSL RSPRQPQPLP RQRNRDQGTS GHLAQSGASH S
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