Gene Synpcc7942_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0115 
Symbol 
ID3773455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp113631 
End bp114146 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content55% 
IMG OID637798521 
Producthypothetical protein 
Protein accessionYP_399134 
Protein GI81298926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0764821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAG TTCGACAAGT TGAAGTTCTT CCCGTCGAAA GCTTTCGTAG CGGTACTGCT 
CAGTTTTTTG CGCCCCAAAC CTGCGATCAA ACCATGGTGG TTGAGCTCGG TGCAGAGCAG
GTGGAAGACT TATTTGTCCA TCACTTCCAA ACCGACCAAC TAATGGTGCT ACAGGGTCAG
TTCGTTCTAG TCGTGCTAGA AAATCGGCGC TATCGCTATC TACCCCTGAG CGATCGCAAA
CGGGAAGTGG TGCGGATTCC GCCGGGGATT CCCCACGGAG CAGTCAATCT CAGTGGCGAA
CCTTGCCTAC TAGTCAATGC GGTTATTCGC CATGGGGAAC CGTGCGATCG CGATTATCGA
CCGCTGCAGC CTCCCCTGCC CTACGACTGG GCAGCCATTC AGCAGGCATT GCAGAGCCTG
CGATCGCCGC GCCAGCCGCA ACCACTACCT AGACAAAGGA ATCGAGATCA AGGGACTTCA
GGCCACCTTG CTCAATCTGG CGCATCACAT TCGTAA
 
Protein sequence
MALVRQVEVL PVESFRSGTA QFFAPQTCDQ TMVVELGAEQ VEDLFVHHFQ TDQLMVLQGQ 
FVLVVLENRR YRYLPLSDRK REVVRIPPGI PHGAVNLSGE PCLLVNAVIR HGEPCDRDYR
PLQPPLPYDW AAIQQALQSL RSPRQPQPLP RQRNRDQGTS GHLAQSGASH S