| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2214 |
|---|
| Symbol | |
|---|
| ID | 3742217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 2125559 |
|---|
| End bp | 2126809 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637772413 |
|---|
| Product | ABC-type sugar transport system periplasmic component-like |
|---|
| Protein accession | YP_378215 |
|---|
| Protein GI | 78185781 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0656001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCAA TCCGGATTCG ACATCTGGCT TTGGGAATCA CGCTGGCAGC GCTCACATCC
GGCTGCGGCA ATTGGCGCCC ACCGGTTGTG ATCACTGTGG TTCGCACGAT CGACAATTCA
GAAACAGTGT CCGCGGAGGA CTACGAACGT CTTCGTGAGA TCACGGAAGA AGCGATTGAT
CACATCAAAA GCGTTGATCC AGCGATCCGT CCTCAGCTGA CGCTGTCGTC TCAGAAAAAC
TTCGTTGAAG AGATTGAGGG TCAAACCCGC AGTGGCTTTG GCCCGGATCT TCTGATCACC
GATAGCGATA CGGCATTGGA GCTCTACCAG CGCAACTTGG TGGATCCGAT TCAACTTGAC
CCGGAAGATC GCGCTGATAC GCCGAGCTAT CTATTCGACC TAGTCACAAG TCAAGACGGC
CAACTGGTGG GCCGTCCAGT GAACCAATTC GTACAGCTGG CCTGCTTCAA CAAGGAGCGC
ATGGCCTCAC CTCCCATGAC TCTGGAGGAG ATGGAAAAAG AGAGCGATGA CAATAACTTT
GGTATGGCGC TTCAACTCAA GGATTTGTTC TGGAGTGCCG AATCCTTCGA CGCCGGGGAG
GCCATGGAAG CCGCCCTCTC GAAGCTGCCC CCCAATACTG AGCGTCAGGC CAACGTGACC
AACTGGCTGC GCTGGCTCGA AAAAGCCAGT TATCAGCAAA ACATTCGTTT CCTCAACGAC
CAGCGCAGCC TCCGCGATGC CTTGATCAGT GGTGAGCTGG ACTGGATCAC CTGCTGGAGC
AGCAGCCTGC GGGACCTTCG ACAACAAATG CAAGGCAAGT TGGCTCTCGC TCCGCTCCCA
AAAGGTCCTT CCACGCAACG CAAAGCCACC ACCAAATTGC AGGTTTGGTC GCTGGGACGC
AATTCCAGTC GGAACCAACG CGAAAAGGCT TTGGTGATGA TCGACTTCAT CAGCAAACCT
TGGGCCCAAA AAACCTATGC CCTGGCAGGG CGTAACTCGT TACCCGTCAA TCGCAAGGCC
GCCAAAATCG TGGCCGCCAA AATTCCCGGT GGAACGGAAG CATTGGTGAT GTATGCCAAG
CAATCGCTTA CAGAAAACGC CGCCAAAGGG CAATCCAAAG CGCGTGTGTT CCGCGATCCA
GAGCGGTATG AAGCCATTTC AGAGGCTTTG CTGGACACCA TCTACGACGT CAGCTCTCCA
GAGGAATCGA GCCAACACAT CCTCAAAAGC TTGCGGGAGA GCGATTCATG A
|
|---|
| Protein sequence | MHPIRIRHLA LGITLAALTS GCGNWRPPVV ITVVRTIDNS ETVSAEDYER LREITEEAID
HIKSVDPAIR PQLTLSSQKN FVEEIEGQTR SGFGPDLLIT DSDTALELYQ RNLVDPIQLD
PEDRADTPSY LFDLVTSQDG QLVGRPVNQF VQLACFNKER MASPPMTLEE MEKESDDNNF
GMALQLKDLF WSAESFDAGE AMEAALSKLP PNTERQANVT NWLRWLEKAS YQQNIRFLND
QRSLRDALIS GELDWITCWS SSLRDLRQQM QGKLALAPLP KGPSTQRKAT TKLQVWSLGR
NSSRNQREKA LVMIDFISKP WAQKTYALAG RNSLPVNRKA AKIVAAKIPG GTEALVMYAK
QSLTENAAKG QSKARVFRDP ERYEAISEAL LDTIYDVSSP EESSQHILKS LRESDS
|
|---|
| |