| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2188 |
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| Symbol | |
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| ID | 3742973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 2094994 |
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| End bp | 2097870 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637772386 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_378189 |
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| Protein GI | 78185755 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTTCCC CTTTTCTGCA GCGGCATTTG GGCCCAAGCG AAACTGAGCA GCACCAGATG
CTGCAAACGC TGGGATACCA GCATTTGGAT GATTTCATCA AGGACGTTGT CCCCGACGAC
ATCCTTGATG CCGCCCCGCC CCGCAACGTG CTTCCTGCAG GGTGTGGCGA AGCTGAGGCA
CTGGCAGATC TCGGCACGAT CGCTGCGAAG AATCTTGTTC AACGATCGCT GATTGGTCTC
GGATATCACG GCACAGCAAC GCCGGCGTTG ATTCAACGCC ACGTGTTTGA GAACCCTGCT
TGGTATACCG CCTACACCCC TTATCAAGCT GAGATTGCCC AAGGGCGGCT TGAGGCGTTG
CTGAATTTTC AAACGTTGAT CAGTGAGCTC ACTGGGCTTC CGATCGCGAA TGCTTCCTTA
CTGGATGAAG CCACGGCCGC GGCAGAAGCC ATGGGCTTGA GCTTTGGTGT GTGTCGACGT
CCCGAAGCGA ATCGTTTCCT TGTCGATTGC CATGTGCTTC CCCAGACCTG GGCTGTGCTG
CAAACCAGGG CGGAGCCATT GGGAATTGAG CTTGAGCGGG TTGATCCCGA GCAGATGGCT
TTTGACACGC GGGTGTTTGG GGTGCTGTTG CAACTGCCCG GCGCCGATGG GCTGCTCTGG
GACCCCACCA CGCTGATCGA GCGGGCCCAC GATGCAGGTG CTCTGGTGAC GGTGGCGATT
GATCCGTTGG CGCAGACCCT GTTCGCGCCC GTTGCGGATT TTGGTGCTGA TATTGCTGTA
GGCAGTGCTC AACGATTTGG TGTGCCGATG GGATTCGGCG GCCCCCATGC AGCATTTTTT
GCGACGCGAG AGGCCTATAA GCGTCAGATT CCTGGGCGGC TTGTAGGGGA GTCGAAGGAT
GCCGAGGGCA ATCCTGCTTT GCGCTTGGCG TTGCAGACCC GAGAGCAGCA CATCCGCAGG
GATAAGGCCA CGAGCAACAT TTGTACGGCG CAAGTGTTGC TGGCGGTGAT CGCTTCGTTT
TATGCGGTGC ACCATGGCCC CGATGGTCTT CGAGCTATCG CCGAACGGCT TGTTGGCCTC
CGTCTTCAAT TCGAAGCTGG CCTTCGCACG CTGGATGTTG CGGTGGAGGA GGCCGACCGT
TTCGACACCG TCACCGTCAC CACCACGCAT GCGCCGGCTG TGCACGCAGC GGCGGCCGAG
GCGGGATTCA ATCTGAGGGT TCTGCCTGAT GGTGTGCCGG CGTCCCAAGC CACCGGATTC
GGCGTCAGCT TCGATGAATT CAGTGATCAG AAGGAGGTAG CCCACCTCCT CGAAGCAGTG
GCCAGGGCGG TTGGCAAGCC CGTGTCCACG GCGCCTGCCT CTGCAGCCAA CACCGCGCTG
CTCTCACTCC CCTCGCGGAT ACGGCCTTGG CTGACGCAGC CAGCGTTCCA TCGCTACCGC
AGCGAAACGG AGCTCATGCG CTACATCCAG CGCTTGGTGA GTCGCGACCT GTCGCTGGTG
CACGGAATGA TTCCGCTGGG TAGCTGCACG ATGAAGCTGA ATGCAGCCGC AGAACTTCTG
CCAGTGAGCT GGCCGGAGTT TGCCCGTTTG CATCCTTTTG CACCTTTGGA TCAGGCGTTG
GGCTATCGCC ATCTCGCCGA CGACTTGGAG CGTTGGCTGG CGGCCCTTAC CGGTTTCGCC
GCTGTTTCAT TGCAGCCCAA TGCTGGCTCT CAGGGTGAAT ACGCCGGGTT ATTGGTGATT
CGTGCCTGGC ACCGCTCCCG CGGGGACAAC CACAGAGATA TTTGTCTGAT TCCCACCAGT
GCCCATGGCA CTAATCCCGC TAGCGCGGTG ATGGCTGGCC TCAAAGTTGT GGCGGTGGCC
TGTGACGCGG AAGGCAACAT CGATCAAGAC GACCTTGCAG CGCGGGCAAC CGAGTACGCC
GATCGGCTTG CGGCCTTGAT GGTTACCTAC CCCTCAACCC ATGGGGTATT TGAAACCGGG
ATTCGTCATA TCTGTGAGGT GGTCCATCGC CATGGCGGTC AGGTGTATCT CGATGGCGCC
AATCTCAATG CGCAGGTGGG CCTCTCTCGA CCTGGAGCCT TCGGTGCCGA TGTTTGCCAC
TTGAATCTGC ATAAAACGTT CTGCATTCCC CACGGCGGTG GTGGTCCAGG GGTGGGCCCG
ATTGGGGTGG CGGCTCATCT GGCGCCGTTC TTGCCTGGGC ATCCCTTTGA AAATCAAACT
GCATCGGCCA TCGGCCCCGT GTCTGCAGCA GCTCTGGGGA GTGCCAGCAT CCTCCCGATC
AGTTGGATGT ATTTACGGAT GATGGGGGCG GATGCCCTCC GTCAGGCCAG TGCCGTGGCG
CTGTTGTCGG CCAATTATTT GGCTCACCGT CTCGATGACC ATTTCCCGGT GTTGTTCCGT
GGTGCCACGG GCCGTGTTGC CCATGAATGC ATCCTCGATC TTCGACCACT GAAGCGAGAT
GCCGGCATCG ATGTCGATGA CATCGCCAAG CGATTGATGG ATTACGGCTT CCATGCTCCA
ACCGTGAGTT GGCCGGTGGC AGGCACCGTG ATGGTGGAGC CCACGGAAAG CGAAAGCTTG
TCGGAATTGG ATCGGTTCGC CGATGCCTTA ATCGCTATCC GTGACGAGGT TCGAGCGATT
GAAACGGGGG CGATGGATGC CTTGAACAAT CCTCTGAAGC GGGCTCCCCA CACCATGGCT
GCGGTGATGG CCGAGGTTTG GGATCGTCCC TACAGCCGCC AGCAGGCTGC ATTTCCCTTG
CCCGATCAAA CCCAAAACAA GGTGTGGCCA GCCGTGGCTC GGATTGATAA CGCCTTTGGC
GATAGAAATC TGATCTGTAC CTGTCCGTCC GTGGAAGCCG TTGCCATTGC GGCCTAA
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| Protein sequence | MTSPFLQRHL GPSETEQHQM LQTLGYQHLD DFIKDVVPDD ILDAAPPRNV LPAGCGEAEA
LADLGTIAAK NLVQRSLIGL GYHGTATPAL IQRHVFENPA WYTAYTPYQA EIAQGRLEAL
LNFQTLISEL TGLPIANASL LDEATAAAEA MGLSFGVCRR PEANRFLVDC HVLPQTWAVL
QTRAEPLGIE LERVDPEQMA FDTRVFGVLL QLPGADGLLW DPTTLIERAH DAGALVTVAI
DPLAQTLFAP VADFGADIAV GSAQRFGVPM GFGGPHAAFF ATREAYKRQI PGRLVGESKD
AEGNPALRLA LQTREQHIRR DKATSNICTA QVLLAVIASF YAVHHGPDGL RAIAERLVGL
RLQFEAGLRT LDVAVEEADR FDTVTVTTTH APAVHAAAAE AGFNLRVLPD GVPASQATGF
GVSFDEFSDQ KEVAHLLEAV ARAVGKPVST APASAANTAL LSLPSRIRPW LTQPAFHRYR
SETELMRYIQ RLVSRDLSLV HGMIPLGSCT MKLNAAAELL PVSWPEFARL HPFAPLDQAL
GYRHLADDLE RWLAALTGFA AVSLQPNAGS QGEYAGLLVI RAWHRSRGDN HRDICLIPTS
AHGTNPASAV MAGLKVVAVA CDAEGNIDQD DLAARATEYA DRLAALMVTY PSTHGVFETG
IRHICEVVHR HGGQVYLDGA NLNAQVGLSR PGAFGADVCH LNLHKTFCIP HGGGGPGVGP
IGVAAHLAPF LPGHPFENQT ASAIGPVSAA ALGSASILPI SWMYLRMMGA DALRQASAVA
LLSANYLAHR LDDHFPVLFR GATGRVAHEC ILDLRPLKRD AGIDVDDIAK RLMDYGFHAP
TVSWPVAGTV MVEPTESESL SELDRFADAL IAIRDEVRAI ETGAMDALNN PLKRAPHTMA
AVMAEVWDRP YSRQQAAFPL PDQTQNKVWP AVARIDNAFG DRNLICTCPS VEAVAIAA
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