| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2173 |
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| Symbol | alaS |
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| ID | 3742665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 2076260 |
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| End bp | 2078959 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637772371 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_378174 |
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| Protein GI | 78185740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG GATCCTCCCT CCTTTCCATG GCTGCCGCCG CTTCGTCGTC TTCTGCAGCA
TCTCTGCCCC AAACGGGTGC TGAGATCCGT TCGGCGTTCC TGCGCTTCTA CGAGGAACGG
GGACACAAGG TGATGGCAAG TGCGTCGTTG ATTCCAGAGG ATCCAACGGT GCTGCTCACC
ATTGCTGGGA TGTTGCCGTT TAAGCCGGTG TTCCTTGGTC AGCAGGAGCG GCCAGCACCG
CGGGCCACGA GTAGTCAAAA GTGCATTCGC ACCAATGACA TCGAGAACGT GGGTCGTACG
GCGCGGCATC ACACGTTTTT CGAGATGCTC GGCAATTTTT CCTTTGGGGA TTACTTCAAG
CAACAGGCGA TTGAGTGGGC TTGGCAGCTG AGTACGGAGG TGTACGGCAT TGATCCCAAG
CATCTGGTGG TGAGCGTCTT CCGAGAAGAC GATGAGGCTG AACAGATTTG GCGAGATGTT
GTGGGGGTGA ACCCCAAGCG GATCATCCGC ATGGATGAAG CCGATAACTT TTGGGCATCG
GGTCCGACGG GACCCTGTGG GCCTTGTTCG GAGATCTACT ACGACTTCAA GCCTGAACTG
GGTGATGAGG GCATCGACCT CGAAGACGAT GACCGCTTCA TCGAGTTCTA CAACTTGGTG
TTCATGCAAT ACAACCGCGA CGCTGAGGGG AGTCTCACGC CGTTGGCGAA CCGGAACATC
GATACGGGAC TGGGTCTGGA GCGGATGGCT CAGATTCTTC AGAAGGTTCC CAACAACTAC
GAAACGGATC TGATTTTTCC GCTGATCCAA GCAGCGGCTG ATTGTGCCGG TGTCGACTAC
CACCAACTCG ATGATGCGGG AAAGACGTCT CTCAAGGTGA TTGGAGACCA CAGCCGTGCT
GTGACGCAGC TGATCTGCGA TGGCGTCACG GCCAGCAACT TGGGGCGTGG CTACATCTTG
CGTCGTCTCT TGCGTCGCGT CGTCCGCCAC GGTCGTTTGC TCGGTATCAA CAAGCCTTTC
TTGGTGATGA TGGGCGAGGC CTCGATTGCA CTTCTAAAAG ACGCTCACCC CTCAGTGTTG
GAGCGGCAGG AGGTGATCTT GGCCGAGCTT CAACGGGAGG AATCGCGCTT CTTGGAAACC
TTGGAACGGG GCGAGAAGCT GCTCTCTGAA GTGCTGGACA GCAAGCCGAA GCAGATCAGT
GGAGCCCAAG CCTTTGAGCT TTACGACACC TATGGCTTCC CATTAGAGCT CACTCAAGAA
ATCGCTGAGG AGCAGGGGCT CGAGGTTGAT TTGGCCGGCT TTGAGGAGGC GATGGAGCAA
CAACGTCAAC GGGCCAAGGC CGCGGCGGTG AGCATCGACC TCACCTTGCA GGATGCGATC
GATCAGGTTG TTGCCACTCA AAAGGCCACC GCTTTCCAGG GGTACCAGCG TCTGGAACAG
CCCAGCTGCG TGCAGGCGTT GGTGGCCAAC GGTGAGCCGG CTACCTCTGC CTCTGCGGGC
GACCATGTGC AAATCGTGCT CGAGTCAACG CCGTTCTATG GCGAAGGTGG CGGCCAGGTG
GGAGACCGCG GGGTGTTGTC TGGTGCCGAT GTCATCGTTG CGATTGAGTC GGTAAGCCGC
AGTCGGGATG TGTTCGTGCA TGCCGGACGG ATTGAACGCG GTCAGCTGAC GGTGGGCGAT
GCGATCACAG CGCAGGTGGA CCGAGCCTGT CGTCGACGCG CTCAGGCAAA CCACACCGCA
ACCCACTTGC TCCAGGCGGC CCTGAAGCAA GTCGTGGATC CAGGGATCGG TCAGGCGGGT
TCCCTCGTGG ATTTTGATCG CCTGCGATTC GACTTCCACG CCCCGCAAGC GGTGACGACT
GAGCAATTAG GGCAGATCGA AACGTTGATC AATGGCTGGA TCGCCGAGGC CCATGGCCTG
TTGGTGGAGG AGATGGCGAT TGACCAGGCG AAGGCGGCTG GTGCCGTTGC CATGTTTGGC
GAGAAGTACG CCGACGTGGT GCGTGTTGTG GATGTGCCTG GGGTGTCGAT GGAACTGTGT
GGCGGAACGC ATGTGGCCAA CACCGCCGAA ATTGGTCTGT TCAAGATCGT TGGCGAGAGT
GGTGTTGCCG CCGGAATTCG CAGAATTGAA GCGGTGGCTG GGGCTTCAGT TTTGGGATAT
CTGAATGAGC GCGAGCTTGT GGTGAAGCAG CTCGGCGATC GCTTCAAGGC GCAGCCCGGT
GAGATCGTTG AGCGGGTTGT GGCGTTGCAG GATGAGCTGA AGAGCACCGG CAAGGCTCTG
ATTGCTGCTC AGGCGGAATT AGCAGTCGCC AAGTCGGCAG CATTGGCAAC GAAGGCCGTT
GCCATTGGCA GTTTTCAACT GTTGGTGGAA CGTCTGGATG GCGTGGATGG CACGGGGTTG
CAAGGAGCCG CCCAGAGCCT GGCTGCCCAG TTGGGCGATG GCGCTGCCGT GGTGCTCGGC
GGTCTTCCCG ATCCATCTGA TCAAGGGAAG GTGATTTTGG TGGCGGCGTT TGGCAAGGAT
GTGATCGCCG CTAAGCAACA GGCCGGCAAA TTTATTGGAA CGATCGCCAA GCTCTGCGGC
GGCGGCGGGG GCGGACGTCC GAACCTGGCT CAGGCGGGTG GACGGGACGG AGCGGCCCTG
GCTGGAGCGC TTGAGACAGC ACGCATGGAG TTAACGGCTG CTCTTCAGCA ACAAGGCTGA
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| Protein sequence | MTTGSSLLSM AAAASSSSAA SLPQTGAEIR SAFLRFYEER GHKVMASASL IPEDPTVLLT
IAGMLPFKPV FLGQQERPAP RATSSQKCIR TNDIENVGRT ARHHTFFEML GNFSFGDYFK
QQAIEWAWQL STEVYGIDPK HLVVSVFRED DEAEQIWRDV VGVNPKRIIR MDEADNFWAS
GPTGPCGPCS EIYYDFKPEL GDEGIDLEDD DRFIEFYNLV FMQYNRDAEG SLTPLANRNI
DTGLGLERMA QILQKVPNNY ETDLIFPLIQ AAADCAGVDY HQLDDAGKTS LKVIGDHSRA
VTQLICDGVT ASNLGRGYIL RRLLRRVVRH GRLLGINKPF LVMMGEASIA LLKDAHPSVL
ERQEVILAEL QREESRFLET LERGEKLLSE VLDSKPKQIS GAQAFELYDT YGFPLELTQE
IAEEQGLEVD LAGFEEAMEQ QRQRAKAAAV SIDLTLQDAI DQVVATQKAT AFQGYQRLEQ
PSCVQALVAN GEPATSASAG DHVQIVLEST PFYGEGGGQV GDRGVLSGAD VIVAIESVSR
SRDVFVHAGR IERGQLTVGD AITAQVDRAC RRRAQANHTA THLLQAALKQ VVDPGIGQAG
SLVDFDRLRF DFHAPQAVTT EQLGQIETLI NGWIAEAHGL LVEEMAIDQA KAAGAVAMFG
EKYADVVRVV DVPGVSMELC GGTHVANTAE IGLFKIVGES GVAAGIRRIE AVAGASVLGY
LNERELVVKQ LGDRFKAQPG EIVERVVALQ DELKSTGKAL IAAQAELAVA KSAALATKAV
AIGSFQLLVE RLDGVDGTGL QGAAQSLAAQ LGDGAAVVLG GLPDPSDQGK VILVAAFGKD
VIAAKQQAGK FIGTIAKLCG GGGGGRPNLA QAGGRDGAAL AGALETARME LTAALQQQG
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