| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2106 |
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| Symbol | |
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| ID | 3742108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 2009599 |
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| End bp | 2010546 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637772304 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_378107 |
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| Protein GI | 78185673 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGATG GGGTTGCCTG CTCGAAGCAG GGCTGGAGGC CGGCGGCATT CAATGCAGGT
TGGGCCCATC ACGATCGTGT GCAGTCCCAT GGCGAAGGTG CATGGTTAAG CCAGTGGATG
GCGAACCGCC ATCAGCACTC AGCAGCGGCC GTTTGGTTGG AGCGGATTGC AGCCGGGGAA
ATGCATCGCA ACGGTGAGCC GTTGGCTGGA GATATGCAGC TGACCAGTGG AGATGACATC
TGTTGGCAGA GGCCACCTTG GCTTGAGGAG GCCATTCCGG ATCAATGGGA CACCATTCAT
GACGATGGTG ATTTGTTGGT GATCAACAAG CCATCGGGGT TGCCGGTGAT GCCTGGTGGC
GGCTTTTTGG AGCACACACT CACCGCATTG CTCGCATCGA CTGGGGCTAA ACCCGTGCAT
CGGCTGGGTC GGTTCACGTC GGGCTTACAG GTTTGTGCCA GGACGGCAGC AACCCGGGCA
GCGTTGTCGA AACAGTTCCG GCCAGAAAGT CGTTGTCAGA AGATCTATCA GGCGTGGGCG
CGTCGGGTGG AGGGGTTGGA GCCCGGCCAA AGCTTGGTGG TGAGCACTGA TGTGGTGGAA
CGCCAGCATC CGTTGCTGGG TTGGATTTGG GGACCAGAAC CTTTGGACCA GGAGCCGACA
AGGAAGCGGC TCACGGCTCA CTCCACGGTG CGCTTGTTGG ACCGTTGCGC TGCTGGAGAT
CGTCTCGAGG TGACAATCCG CACGGGGCGG CCCCATCAGA TCCGGATTCA TTTGGCCCAG
TTGGGCAGTC CTTTATTGGG AGATCCGCTG TACCTGCTCA ATCGCAAGAT TTCTGAGACA
GCAACCCCTG GGGATGGTGG ATATGGCTTG CATTCCTGGC GGTTAAACGC ACTAACTGCG
GCAGGGTTGT CGTTTACGGC TCCCCTGCCG AAAGAATTCG ACTTTTAA
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| Protein sequence | MVDGVACSKQ GWRPAAFNAG WAHHDRVQSH GEGAWLSQWM ANRHQHSAAA VWLERIAAGE
MHRNGEPLAG DMQLTSGDDI CWQRPPWLEE AIPDQWDTIH DDGDLLVINK PSGLPVMPGG
GFLEHTLTAL LASTGAKPVH RLGRFTSGLQ VCARTAATRA ALSKQFRPES RCQKIYQAWA
RRVEGLEPGQ SLVVSTDVVE RQHPLLGWIW GPEPLDQEPT RKRLTAHSTV RLLDRCAAGD
RLEVTIRTGR PHQIRIHLAQ LGSPLLGDPL YLLNRKISET ATPGDGGYGL HSWRLNALTA
AGLSFTAPLP KEFDF
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