Gene Syncc9902_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2054 
Symbol 
ID3743422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1962074 
End bp1963267 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content41% 
IMG OID637772251 
Productglycosyltransferase 
Protein accessionYP_378055 
Protein GI78185621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCAT TCGGCATCCA GAAACTTTAC CTCAAAGACG AACCTACGAA CATAGTTCAA 
GCTGCTTCTG CACGATTAAG AAACAGACAA ACAATCACAC CAAATAGTTG CGATATCATC
ACAATTACAG GTAACGAAGA ATGCTATATC GCCCAGTTTA TTCACCACTA TCTTTACTTG
GGATTCAGCA ATATATTTAT CGGGATCAAT AATTGCCAGG ACAAAACTCC AGCCATTCTC
AAGAAAATTG CCAAGATATA TCCGAAAATT TTTATCTTCA ACACCGATCA ACCGCAACGC
CTCCATCGGC AAAGCGGCTC CTATGCGGCA CTGATCGATG AGGCATCTCA TCGCACTAAG
TCGAGCCATT GCCTCGTGGT CGATATCGAC GAATACTGGT TCTCCAACAA GCCGAACCGA
TCGATTGCGA GCTACCTCAG ACAATTCGAT CGATTTGATT TGATGTTTAC CAATTGGCTT
TGCACCTATG GGCAAAGCTA TCAGACATGT TTTACAGACC TAACAAAGGC CAAGATTGAA
CTAAAAAAAT CACAGGGGAA AAGTATTTTC AACTACTCAG TACCACTACG CAAACTTCGA
GCACATGTGC CCGATGTGGA ATCTCCAGAG AGAGCCGTTT TTGTTGGCAA CAATGGCAAA
AAAATTAATT GGATGAATGA AGCCAACAAA CTGCATGTAA ATCCATCCCT GCCTCAACAC
CTAAGAACAG TGAATAAATT GCACCAACAT CTCGAGGAAT CACAAAACTC GGCATGGATT
CTGCATCAGA TTGTTCGCAG CGAGCTGGAA TATTCATTAA GACTCTTTGA ACCTAGGGTT
GCCAAGCATC CAGAACCATT TAAAACCAAT CGCCACGGCT GGATCATGCC GAAAGAGAGT
CGACAAGAGC GACAATTTTT CAAATTAATC CTTTCAAAAA AATCTTTCAA CAAACGCTAC
ATAAAAACCT ATGAGAAATT CCTTCGTCAA TGTCAAATCA AGAATATTGT CGAAAAAAGC
TTTAACCGCA TCACCGAGAG ACAAGTCTTT TGTAAAATTA ACCAGCTAAA TCATCAAAAA
ATTGAAGCTT ATCAGTCTAT TTGGAGAGAA ATATTTCAAG GAACCCGCTT TCTCCCCTAT
CTAGAGCTGC GCCTAAAAAC AAAAAAGCGA CTCCGAATCA ACGATTGTTC TTGA
 
Protein sequence
MRPFGIQKLY LKDEPTNIVQ AASARLRNRQ TITPNSCDII TITGNEECYI AQFIHHYLYL 
GFSNIFIGIN NCQDKTPAIL KKIAKIYPKI FIFNTDQPQR LHRQSGSYAA LIDEASHRTK
SSHCLVVDID EYWFSNKPNR SIASYLRQFD RFDLMFTNWL CTYGQSYQTC FTDLTKAKIE
LKKSQGKSIF NYSVPLRKLR AHVPDVESPE RAVFVGNNGK KINWMNEANK LHVNPSLPQH
LRTVNKLHQH LEESQNSAWI LHQIVRSELE YSLRLFEPRV AKHPEPFKTN RHGWIMPKES
RQERQFFKLI LSKKSFNKRY IKTYEKFLRQ CQIKNIVEKS FNRITERQVF CKINQLNHQK
IEAYQSIWRE IFQGTRFLPY LELRLKTKKR LRINDCS