Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2038 |
Symbol | |
ID | 3742998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1947690 |
End bp | 1948472 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637772235 |
Product | hypothetical protein |
Protein accession | YP_378039 |
Protein GI | 78185605 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCACCT CGCCAGATGA CGCGACAACC CCAAAGCAGC GCCGAAAGCG AAAGCGGTCG ACGATCGAAC GTGTTATCCG CTGGGGGCCT TGGCACTATC GCTTTTGGCG AGAAATCGCC CGTTGGTGTT ACGAACAATC CCTCCACAAT CCTGCTGTGG TGGACGAGGC TCTTGGGTTT CCTAACCATG TGGAACTCCT ACAGAGCTAC GACGCCATTC GTCGAGAAAC CTTGGAGATC GCGCTTTCAG GTCGGCTACC GGCCAACCAC GAAATCATGG AGCAGCAACG CACCCTGTAC GAATTTGATC GCAAAGCTTG GGGAATGCTG CCACTACGGG GCTACGGCTA CAACTACCCG GCCAATCAAG ACCTCATCCC GACGCTCAAA TCTTTTTTAA AACGGCACCC CGATGTGGTG TCTGCTGCAG TAAGCCTGTT CCCACCTGGA AAAATATTGC GGCCACACAA AGGACCGTTC AAAGGAGTGT GGCGTTTTCA CCTTCCCCTG TATGTGGAAA CGCTTGAGAA CGAAACAACA TCCTGTGAAC TGATGATCGA TGGAGTGACG TATTACCTCC AGGAAGGCGA GGGATTCCTC TGGGACGACA CGTTTCTCCA CTCCGCAGTC AATCGTTCTG AACAACCTCG GGTGGTTCTG TTATTTGATG TCTTCCGGCA TGACCAGCCG TTTTGGTTGG TCGGCATGAG TTGGGTCTTC CTCTGGGTCG CCCAAATTTG GCAACACCTT CAAAACATGC GCGAGCGTGC CCTATTGCGA TGA
|
Protein sequence | MLTSPDDATT PKQRRKRKRS TIERVIRWGP WHYRFWREIA RWCYEQSLHN PAVVDEALGF PNHVELLQSY DAIRRETLEI ALSGRLPANH EIMEQQRTLY EFDRKAWGML PLRGYGYNYP ANQDLIPTLK SFLKRHPDVV SAAVSLFPPG KILRPHKGPF KGVWRFHLPL YVETLENETT SCELMIDGVT YYLQEGEGFL WDDTFLHSAV NRSEQPRVVL LFDVFRHDQP FWLVGMSWVF LWVAQIWQHL QNMRERALLR
|
| |