Gene Syncc9902_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2006 
Symbol 
ID3743728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1911620 
End bp1912579 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content44% 
IMG OID637772203 
Productthioredoxin-disulfide reductase 
Protein accessionYP_378007 
Protein GI78185573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.827549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACT TCATCGACTC AGACGTACTC ATTATTGGCG GAGGGCCTGC CGGATGTGCT 
TGCGCTCTAT ACACAGCAAG ATCATCAATC AAAACACAAA TACTTGATAA AAACCCTGCC
GTGGGTGCTT TGGCCATCAC CCATCAGATC GCCAATTATC CAGGAGTAAC AGGAGCTGTA
TCAGGAGCAG ATCTATTAAA ATCAATGCGA GATCAAGCCG TAGGCTATGG AGCTAACTAT
CAGCAGGCTC AGGTATATGG TATCGATCTA AGCTCAGATA AAAAGATTGT ATATACACCG
GAGGGAACAT TTCGAGGGAA AACTCTTGTT TTAGCAACGG GAGCAATGGG ACGCGCATCT
ACACTTCCCG GTGAAAGTGA ATATCTTGGC CGAGGAGTTA GTTATTGTGC CACATGTGAT
GCTGCCTTCT ATAAACAACA AGAGGTGGCT GTCTATGGGG CAAATCAGGA GGCAATTGAT
GAGGCTATGG TATTAATTAA GTTCGCATCT AAAGTACATT GGATCACGAA GAGTAAGCCT
AGGCCTTCAA TACAGGGCGT CGAGACGTTA CTGAACTCTC CAAACATTCA GTGGTGGAAG
CGTACACAAC TGATGGAGAT AGAGGGCGAC GAGTCAGGAG TTAATCAGAT CAAAATTTTA
GAGGGTGGCA AACAAGAACC GCAAATATTA AAAACCAACG GAGTCTTCGT TTATTCAACT
GGGTCGATGC CAATTACTGA ATATTTGCAA GGGCAGATTC CCTTAAATAA TGAAGGTGGA
GTTCAAGTTG ATGAAAACAT GAAAACCAAT ATTGATGGTG TTTGGGCCAT CGGCGATATT
AGAAATACTC CATTTAAGCA AGCCGTCGTT GCCTGCTCTG ATGGATGCAT TGCTGCAATG
TCGATTGACA AATACTTAAA CCAGCGCAAA GAGATTCGGG TGGACTGGGT TCACCGATAA
 
Protein sequence
MTDFIDSDVL IIGGGPAGCA CALYTARSSI KTQILDKNPA VGALAITHQI ANYPGVTGAV 
SGADLLKSMR DQAVGYGANY QQAQVYGIDL SSDKKIVYTP EGTFRGKTLV LATGAMGRAS
TLPGESEYLG RGVSYCATCD AAFYKQQEVA VYGANQEAID EAMVLIKFAS KVHWITKSKP
RPSIQGVETL LNSPNIQWWK RTQLMEIEGD ESGVNQIKIL EGGKQEPQIL KTNGVFVYST
GSMPITEYLQ GQIPLNNEGG VQVDENMKTN IDGVWAIGDI RNTPFKQAVV ACSDGCIAAM
SIDKYLNQRK EIRVDWVHR