Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1998 |
Symbol | |
ID | 3743720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1904029 |
End bp | 1904652 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637772194 |
Product | CRP/FNR family transcriptional regulator |
Protein accession | YP_377999 |
Protein GI | 78185565 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00839318 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATAA GCACAAACGA AAATGAACGC AAGGGGCCGC TCAAGCCATG CTCACTACAA GCAGGGCAGA GGCTCATACT CACCAAGCCA ATTCACAACT GGCCAACAAC AATCGTTGCC ACGCAAGGAA TAATCCGATT ATCGACCGTT GAAAATGAAA GCCATCCAGA AATCACAGTG GCGCTTATGT CGTCGTTAGA CGACTGCAAG TTCTGCCATC CCGGCTCAGA GAATCTACAA ATCGAAGCCA TAACAGACTG CATCATCAAG ATCAACAATG AACAAAAAGT CCATGCTGCT AACGATGACT TTCTCCAGGA ATGGATTTTT AGACTGTATA CAGTAAGACA TCCGATCAAG TCAGAAGATC GGCTTAAGTC TTTACTCCAG CTTTTAATTA TCAGGCTTGG CAAACGAACG CCAGAAGGTT ACAAGCTTCA ATTTTTACTA TCTCATTCTC GACTCGCAGA GATGATTGGT ACGACAAGGT CAACAGTGAG CCGGTCGCTC GGAGCACTTA AGGACAAGGG AATTATTTCA ATCGATGAAA TGAAAGAAGA ACTCGTCGTC AGAGATTCAG AACTAATCCC GACCACAGCG ACAAGAGTTA CCCTTCCACT TTGA
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Protein sequence | MAISTNENER KGPLKPCSLQ AGQRLILTKP IHNWPTTIVA TQGIIRLSTV ENESHPEITV ALMSSLDDCK FCHPGSENLQ IEAITDCIIK INNEQKVHAA NDDFLQEWIF RLYTVRHPIK SEDRLKSLLQ LLIIRLGKRT PEGYKLQFLL SHSRLAEMIG TTRSTVSRSL GALKDKGIIS IDEMKEELVV RDSELIPTTA TRVTLPL
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