| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1902 |
|---|
| Symbol | |
|---|
| ID | 3742745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1821955 |
|---|
| End bp | 1822449 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637772097 |
|---|
| Product | C-phycoerythrin class I alpha chain |
|---|
| Protein accession | YP_377903 |
|---|
| Protein GI | 78185468 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCTG TCGTTACCAC CGTCGTGACT GCTGCTGACG CAGCAGGTCG CTTCCCCTCT
CAGAACGATC TCGAGGCTGT TCAGGGCAAT ATCCAGCGTG CAGCTGCACG TTTGGAAGCT
GCTGAAAAGC TTGCTGCTGG TCTTGACGCT GTGACTCGTG AAGCGGGCGA TGCTTGCTTC
AACAAGTACG CCTACCTCAA GCAGCCTGGT GAAGCTGGTG AAAACCAGGT CAAGGTGGAC
AAGTGCTACC GCGACCTCGG CCACTATCTG CGCCTCATCA ACTACTGCTT AGTTGTTGGT
GGCACCGGCC CTCTCGATGA GTGGGGCATT GCAGGTGCAC GTGAGGTTTA CCGCAGCTTG
GGACTTCCCA CCGGCCCTTA CGTCGAAGCT TTGACCTACA CCCGCGACCG CGCTTGCGCT
CCTCGTGACA TGGGTCCTCA GGCTCTGAAT GAATTCAAGA GCTACCTGGA CTATGTGATT
AACGCTCTTT CCTGA
|
|---|
| Protein sequence | MKSVVTTVVT AADAAGRFPS QNDLEAVQGN IQRAAARLEA AEKLAAGLDA VTREAGDACF
NKYAYLKQPG EAGENQVKVD KCYRDLGHYL RLINYCLVVG GTGPLDEWGI AGAREVYRSL
GLPTGPYVEA LTYTRDRACA PRDMGPQALN EFKSYLDYVI NALS
|
|---|
| |