Gene Syncc9902_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1882 
Symbol 
ID3742940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1806314 
End bp1807018 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content57% 
IMG OID637772077 
Producthypothetical protein 
Protein accessionYP_377883 
Protein GI78185448 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGGAA CGGTGGCTCT CAATCTGCGC ACCTGGGTTG CACCAGAAAC AGTTCGTCCA 
CAACAATTCG AGGGCGAGTG CATCGATGCA CGGGGGGCCA ACTGGAGCGA ACAAGATCTT
GGCGAGCAAG ACCTTCGCAA CGCCAATTTA TGCAGATGCG ACCTACGAGG CAGCAACTTA
AGTCGCTGCC AACTGGAGGG AGCAGACCTG AGGCTTGCTC GTTTTGACAA TGCCACGACA
GTGCCCAATG GTTTTGACCT ATTCACCAGC GGAGCCGTCG GCCCGGGAGC CAAGCTCAAT
GGGGCATTTC TGAACAATGC CGATCTACGC GGTGTTGACC TACGGGGAGC TGTCTTAATG
GGGGCCTACC TCAGCGGTGC CGACCTGAGT GGTGCACTGC TCGATGGTGT GTCTTTAGCT
GGATCCGACC TTCGTTTCGC CACTCTTCGC GGCGCGATGT GCCGGGCGAC CCGGTTTGGC
ACGAGCCAAC TTGATCTCGC TGATTTCCGT GGTGCTGATC TCCAAGACGC TGCTCTAGAC
AGCGTTGAAT CCATCAAAGG GGCTGACTTC AGCCATTGCT CAGGGCTCAA TGCTCAGATC
ACCAACCTGT TGAATCGATC GGCAATGGAA CTGGATCACT GGAATCCGTT AACGCGCGGC
ACTACACGAA CAAGCCTGGA ATCGCTTCTC AGCCCCCAGC GCTGA
 
Protein sequence
MVGTVALNLR TWVAPETVRP QQFEGECIDA RGANWSEQDL GEQDLRNANL CRCDLRGSNL 
SRCQLEGADL RLARFDNATT VPNGFDLFTS GAVGPGAKLN GAFLNNADLR GVDLRGAVLM
GAYLSGADLS GALLDGVSLA GSDLRFATLR GAMCRATRFG TSQLDLADFR GADLQDAALD
SVESIKGADF SHCSGLNAQI TNLLNRSAME LDHWNPLTRG TTRTSLESLL SPQR