Gene Syncc9902_1882 details

Gene Information

• Locus tag: Syncc9902_1882
• ID: 3742940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1806314
• End bp: 1807018
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637772077
• Product: hypothetical protein
• Protein accession: YP_377883
• Protein GI: 78185448
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGGAA CGGTGGCTCT CAATCTGCGC ACCTGGGTTG CACCAGAAAC AGTTCGTCCA 
CAACAATTCG AGGGCGAGTG CATCGATGCA CGGGGGGCCA ACTGGAGCGA ACAAGATCTT 
GGCGAGCAAG ACCTTCGCAA CGCCAATTTA TGCAGATGCG ACCTACGAGG CAGCAACTTA 
AGTCGCTGCC AACTGGAGGG AGCAGACCTG AGGCTTGCTC GTTTTGACAA TGCCACGACA 
GTGCCCAATG GTTTTGACCT ATTCACCAGC GGAGCCGTCG GCCCGGGAGC CAAGCTCAAT 
GGGGCATTTC TGAACAATGC CGATCTACGC GGTGTTGACC TACGGGGAGC TGTCTTAATG 
GGGGCCTACC TCAGCGGTGC CGACCTGAGT GGTGCACTGC TCGATGGTGT GTCTTTAGCT 
GGATCCGACC TTCGTTTCGC CACTCTTCGC GGCGCGATGT GCCGGGCGAC CCGGTTTGGC 
ACGAGCCAAC TTGATCTCGC TGATTTCCGT GGTGCTGATC TCCAAGACGC TGCTCTAGAC 
AGCGTTGAAT CCATCAAAGG GGCTGACTTC AGCCATTGCT CAGGGCTCAA TGCTCAGATC 
ACCAACCTGT TGAATCGATC GGCAATGGAA CTGGATCACT GGAATCCGTT AACGCGCGGC 
ACTACACGAA CAAGCCTGGA ATCGCTTCTC AGCCCCCAGC GCTGA 

 

Protein sequence

MVGTVALNLR TWVAPETVRP QQFEGECIDA RGANWSEQDL GEQDLRNANL CRCDLRGSNL 
SRCQLEGADL RLARFDNATT VPNGFDLFTS GAVGPGAKLN GAFLNNADLR GVDLRGAVLM 
GAYLSGADLS GALLDGVSLA GSDLRFATLR GAMCRATRFG TSQLDLADFR GADLQDAALD 
SVESIKGADF SHCSGLNAQI TNLLNRSAME LDHWNPLTRG TTRTSLESLL SPQR