Gene Syncc9902_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1788 
Symbol 
ID3742542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1716208 
End bp1716726 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content55% 
IMG OID637771979 
Producthypothetical protein 
Protein accessionYP_377789 
Protein GI78185354 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.190801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCAG AGCTGGAGCC AGTTGCTCTT CAAGAGCTAC GGGCCCTTGG CAGTCCAAAA 
ACATGGGAGT TTGAGGGTCA TCTCGATGCT CTTCCGTCGT TAACACCCGT GCGCGGTGAG
ATCCAGGCTG AACATCGCGG CAATGTGCTT GCTGTGGAAG CAGAGCTCAG CACAATCGTG
ACTCTTAGCT GTGACCGTTG CCTTGGACAG TTCAATCATC AGTTGTCGTC CTCCCCTTCT
GAGCTGATCT GGTTGGGCGA CCAACCACCA ACAGAAGACC AATTGCAGTT ATCCGAGGAG
ATCTCCGAAC TGGAGGGACT CGTCGAGACC CTCGACCCAC GCGGTAATTT CGATCCCCAG
CAATGGGCTT TCGAGCAACT GAATTTGCAG CTACCCGTTG TGAACGACTG CGGTGAGTCG
TGCCCTGGAG CGCCAACATT TAATCAAGAG ATTGTCGCCA ACCTCGAGCC ACCGACAGAT
CCACGTTGGG AAGCGCTGAG GCGCCTTAGT GACCCATGA
 
Protein sequence
MIPELEPVAL QELRALGSPK TWEFEGHLDA LPSLTPVRGE IQAEHRGNVL AVEAELSTIV 
TLSCDRCLGQ FNHQLSSSPS ELIWLGDQPP TEDQLQLSEE ISELEGLVET LDPRGNFDPQ
QWAFEQLNLQ LPVVNDCGES CPGAPTFNQE IVANLEPPTD PRWEALRRLS DP