Gene Syncc9902_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1743 
Symbol 
ID3742153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1676138 
End bp1676971 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content61% 
IMG OID637771934 
Producthypothetical protein 
Protein accessionYP_377744 
Protein GI78185309 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTTC TTGCTCTCAG CCCTGGCTCG TCCCAAGACC AACTGGATCG TCTACCCGCC 
CTCGAGAGCC TCTGCCAGCA ACTCGGCGCG TCCCTATTTG TGGCCTGTGA CCCGGGAGTC
AGCGCCGCCT GGCAGCTGCT GCCCTGCGTC GAAAAGGTAT TCCCCTTCAG CTTCGAAGCC
GGCCCCAGCC TCGCTGACTG GGCCAATTTG CTCGGCAATG TGCGAGAGCC AGATTTTCAA
GTCTGCGTCA ATTTCGCCGA GGGACAGCAG GTCAACCTGA TGCTGTCGAT GAGCCACATC
CCGAGTCGAA TCGGGACATC AGGATTTGCA TGCACTGAGC AAGTTCAAGC CGGGGATGGC
TTTGCAGCCC AACGGCTTTC GACCTACCTC TCTCCGCTCG GCTGCAGCCT CGACGCCGAT
GCATTTCGCC TAGCCCTGCC AAGCCAAGAG CTCGAGGAAG CTCGCTCGAG CCAGCCCCCA
GGGGATGGGC CGATGCTGAT TCTTGCTCCA TCCTCAGAGG ATCAGGACTG GCCCCCAGAA
CGGTGGTTAG CACTTCCGAA GAGCATCTCC ACCCGTCTTG CGACCCTGCG ATCAAGCACC
TTGGATCCGG GCCTACCGAT GCGTCGACGG GCCGCTGCCG TGGCCTGCGC TGATGTGATT
CTCAGCAGCT GTGCCATGAC ACAGCGCTTA GCTGTCTACT GCGGAATCCC CCTCGTGGCG
TTGGGAGCAA CCCCAACCGA CTTCCCACCG CGCGGCGACA TTCGCTGTTT AGGGGTGAGA
TCCGATCTGG CTTCACTTAC TGAGCAGGAG GTGTTGGATG CCCTCGGCTT TTAA
 
Protein sequence
MRVLALSPGS SQDQLDRLPA LESLCQQLGA SLFVACDPGV SAAWQLLPCV EKVFPFSFEA 
GPSLADWANL LGNVREPDFQ VCVNFAEGQQ VNLMLSMSHI PSRIGTSGFA CTEQVQAGDG
FAAQRLSTYL SPLGCSLDAD AFRLALPSQE LEEARSSQPP GDGPMLILAP SSEDQDWPPE
RWLALPKSIS TRLATLRSST LDPGLPMRRR AAAVACADVI LSSCAMTQRL AVYCGIPLVA
LGATPTDFPP RGDIRCLGVR SDLASLTEQE VLDALGF