Gene Syncc9902_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1740 
SymbolubiA 
ID3742150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1673605 
End bp1674495 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content58% 
IMG OID637771931 
Productprenyltransferase 
Protein accessionYP_377741 
Protein GI78185306 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAGCA GCATCCCCAG CCTCCGCCCC TGGATCGAAT TACTCCGCTG GAACAAACCA 
TCGGGGCGAC TCATTTTGTT GATCCCTGCT GGGTGGTCTC TCTGGCTCAC GCCGTCTGCT
CCCCCCAGTG CCTCATTGGT TGGAGTGATT TTGGTGGGAG GGCTTGCGGT GAGTGGAGCA
GGCTGCATCG CCAACGATCT TTGGGACCAA GGGTTCGATC GTCAGGTGGA ACGAACCCAA
GGTCGACCGC TTGCACGTGG AGCCCTGCAA CGACCCCAGG CGTTATGTCT TTTACTTGTG
CTGCTTCTCG TCAGCCTGGG GGTGGTCCTG AGCCTGTCCG ATGAGAGTCG GGGCCTGTGC
TTGGGCTTGG CGGTCGCCGC CTTACCGCCC ATTCTTTTGT ACCCGTCTGC CAAACGCTGG
TTTGCCTTCC CCCAGGCCGT TCTTGCCCTG TGCTGGGGAT TTGCAGTGCT GATCCCATGG
GCTGCTGCAG AAGGGCAACT GAGCTGGAAT CCAGCGCTGA TCAGTTGCTG GATCGCAACC
CTGCTATGGA CCTTTGGATT CGACACGGTT TATGCCATGG CGGATCGAAG AGATGATGCC
CAAATCGGCC TACGCAGCAG CGCCCTGAGC CTTGGGGAGT CCGCGACGTC AGTCGTTCGG
ATTTGTTATG CGCTCACCTG TTTTTCCATG GCCATCGCAG CCACAACGGC CCAAGTCGCC
GCTCCGTTTT GGCCCTTTTG GCTCATGGCC ACGGTCTTGA TGCAAGTCAG TTGCTCACCC
CTAACGCGAG AAAAAGCATC GATGGTGCTA TTTGCCCGTC ATTTCAGTCG GCAGGTCCAA
GTGGGAAGTT TGTTATTGAT CGGGCTGTGC CTGGCAAGGG CTTGGACCTG A
 
Protein sequence
MNSSIPSLRP WIELLRWNKP SGRLILLIPA GWSLWLTPSA PPSASLVGVI LVGGLAVSGA 
GCIANDLWDQ GFDRQVERTQ GRPLARGALQ RPQALCLLLV LLLVSLGVVL SLSDESRGLC
LGLAVAALPP ILLYPSAKRW FAFPQAVLAL CWGFAVLIPW AAAEGQLSWN PALISCWIAT
LLWTFGFDTV YAMADRRDDA QIGLRSSALS LGESATSVVR ICYALTCFSM AIAATTAQVA
APFWPFWLMA TVLMQVSCSP LTREKASMVL FARHFSRQVQ VGSLLLIGLC LARAWT