| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1658 |
|---|
| Symbol | |
|---|
| ID | 3743936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1606888 |
|---|
| End bp | 1608150 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637771850 |
|---|
| Product | putative dihydroorotase |
|---|
| Protein accession | YP_377660 |
|---|
| Protein GI | 78185225 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACA CCCTGCTGCT CGATCCGGTT CGCATCCTGC CTGGCATCGG CCAGTCGGTT
GAGCAGGGGG CTGTCCTGGT GGAGAAGGGG GTTCTAACGG CGTTTGACGG CGATGCCCGT
CAAAAGGCCA AGGCCTTAGG GCTGCCCCCC ACAGAAGCGC CTGAGCAACT GCTCGCTCCA
TGCTTAGTGG ATCCCCACTC CATTCTGGAA ACACCGTTTA GCGGTGATCA CGAAACCATT
GAAAGCCTGC GGCGTTGCGC CGCCTCAGGC GGCTATGGAC AAGTGGCTCT TTTGCCCCGT
GGCCGAACCT GGCGAGACCA ACCAGAGTGC CTTCAAGGCT TTTCCAAAGA CCCCAAGAAC
GGCGTTCAAC TTCACCTTTG GGGAGGGTTC AGCCAGGGTG GAACATCCGA ACGGTTAGCG
CCCCATGGCG ACTTGCTCGA ACACGGCGCC ATTGGATTAG CCGACGACGA TGCCCTGATT
TCACCTCAGT TACTGGAACA GGGCTTGGTC CTCGGAGAAA TGGGCAGTTG CCCTGTTCTC
GTCGCCCCGC GGGACCCCTG CCTACAGGGG TCTGGCATGG TGCGGGAGGG GGTCGAAACA
CTGCGGGCTG GATGGCCCCC AGACCCCATG AGCAGTGAGA TCCTCCCTAT CAGCCAACTG
CTGGCGTTAC ATCAACGCCA CCCCGATCGA CAACTGCGCC TAATGAACCT GTCCACCGCT
GCAGCGGTGG AGCAACTCGT GGCCTTTGGA GACCATCCAC CCTTAAGCAG TGTCAACTGG
TGGCATCTCC TTGCAGATCG CAATGGTTTG GCTGCGGACG ATCCTGGCTG GCGGGTTCGT
CCCTCCCTCG GGGGGGGGCA AGACCGAGAA CGGCTCATTG ATGCCGTGCT CAGTCAAACC
ATCACAGCGA TTTCAGTTCA TGCGGTGTCG CTCGATGACG AGGACATGCT GTTGCCCCCA
GATCAGCGAC CTCCAGGGCT CTGCGGCCAT CACCTGGTTC TCCCCACTCT TTGGGATGCC
CTCGTTCGGC AACGGAACAC GTCAGTGGAA CAACTCTGGC AGGCCTTGAG TTTTGGCCCA
TCGGCTCTAA TCGATCAACC ACCGGAAGAA CTACGCCGCG GCAGTCGACG CTGGCTCCTC
TTTGATCCCA ACCATGAATG GACCGTCCGC CGGGACGACC CCCAAGCTCC CCGGGGGGCC
AACATGCCGT ACCTCGGTCA AGCGATGAAA GGACGCGTGG TCGCCTGCGG ACTTAATCGC
TGA
|
|---|
| Protein sequence | MDNTLLLDPV RILPGIGQSV EQGAVLVEKG VLTAFDGDAR QKAKALGLPP TEAPEQLLAP
CLVDPHSILE TPFSGDHETI ESLRRCAASG GYGQVALLPR GRTWRDQPEC LQGFSKDPKN
GVQLHLWGGF SQGGTSERLA PHGDLLEHGA IGLADDDALI SPQLLEQGLV LGEMGSCPVL
VAPRDPCLQG SGMVREGVET LRAGWPPDPM SSEILPISQL LALHQRHPDR QLRLMNLSTA
AAVEQLVAFG DHPPLSSVNW WHLLADRNGL AADDPGWRVR PSLGGGQDRE RLIDAVLSQT
ITAISVHAVS LDDEDMLLPP DQRPPGLCGH HLVLPTLWDA LVRQRNTSVE QLWQALSFGP
SALIDQPPEE LRRGSRRWLL FDPNHEWTVR RDDPQAPRGA NMPYLGQAMK GRVVACGLNR
|
|---|
| |