Gene Syncc9902_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1537 
Symbol 
ID3743393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1486798 
End bp1488156 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content59% 
IMG OID637771725 
Producthypothetical protein 
Protein accessionYP_377539 
Protein GI78185104 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.90174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGCG CCGATGCGCT TCTCGCTCTA AGACATGATC TCGCCAATAT TTCTGAACTG 
GATCTTCAGG ACGATCCCGG ACAGTTGCTG CGATGTTCCC GCGATGCATA CGACTACTCG
CCTGTACTGA GTCCCAAGCT CGCGGGGGCT CGAGCGCAAT TGGTGTCTCG CCCTCAGTCG
GTGGCCGCCG TCGAGCAGTT AGCAGCAGCG TGTACCAAAC ATGGAGTCCC TCTCACTGTG
CGGGGTGCTG GCACCGGGAA TTACGGGCAA TGCGTTCCCC TCGAGGGCGG GGTGGTGATG
CTCACCACTG GTTTACAGCG TATTCGCAAG TTTGATCCCG TCACGGGGAT CGTCACGGTG
GAGCCGGGTT GCCAGATGAG TCAGCTGGAT CAGGAGCTAC GCCGCCATCA CCGCGAGCTG
CGATTGCTTC CCAGTACCTG GCGTAGCGCA ACGGTGGGTG GATTTGTTGC TGGGGGATCG
GGGGGGATTG GTTCGATTCG CTGGGGATTT TTGCGCGATC CAGGTCACTT GTTGGGTCTT
GAGGTCGTGC CGATGACGAC GGATGCCCAC TGCCATCAAT TGAATGAAGT TGAGGCGGAA
GCACTGAACC ATTCCTACGG CACGAACGGG ATCATTACGG CGTTGACGTT GTCTACGGCT
CCTGCGGTGA ACTGGCATCA GGTCTGCATC GACTGCATGG ATTGGGCCGA TGCCGTGGCC
GTGTTGTTGG CGTGTGGACG TTCCGCTGTG TCGCTCCAGC TCGCGACGGC CTTAGAGGCC
TCCGTTTTGG AGCGCTTGCC TGGCTGGAGT GGCCCGGCCA AGGGGCATCA CAGGTTGTTG
TTGTTGGTGG CCCCGGATGG CATCGCAAGC CTGAAACGGT TGGCCGCTCA TGCCGGGGCT
GACCTGCAGG ATCTTGGCCC AGAGGATTTC AATGCTGGTA ATGGTTTACG GGAACTGAGT
TGGAATCACA CCACGCTGCA TATGCGCGCT TCGGAGCCGG GTTGGACGTA CCTGCAAATG
CTGTTACCTC AACCAGAACT CCCTGCCATG CAGGCGCTTC GAGACCATTG GGGCGATGAT
TTGCTTTGGC ATCTGGAGCT TGTGAAGCAG CAAGGTTCCG TGCGTGTGGC GGCGTTACCC
CTCGTGCGTT GGCGTGGAGC TGCGTTGTTG GAGCAGCTCA TGGACGACTG TCGTGCCCAT
GGCGCTGTGG TGTTTAACCC CCATGTGATC ACTGTCGAAG ATGGGGGACT TGGTGTTGTG
GACGGTGATC AAGTTTCAGC CAAACAACGC TTTGATCCGG ATGGCCTGAT GAATCCCGGC
AAACTTCGGG GTTGGCTCGA GCGTGCTCAA AACAGCTGA
 
Protein sequence
MTRADALLAL RHDLANISEL DLQDDPGQLL RCSRDAYDYS PVLSPKLAGA RAQLVSRPQS 
VAAVEQLAAA CTKHGVPLTV RGAGTGNYGQ CVPLEGGVVM LTTGLQRIRK FDPVTGIVTV
EPGCQMSQLD QELRRHHREL RLLPSTWRSA TVGGFVAGGS GGIGSIRWGF LRDPGHLLGL
EVVPMTTDAH CHQLNEVEAE ALNHSYGTNG IITALTLSTA PAVNWHQVCI DCMDWADAVA
VLLACGRSAV SLQLATALEA SVLERLPGWS GPAKGHHRLL LLVAPDGIAS LKRLAAHAGA
DLQDLGPEDF NAGNGLRELS WNHTTLHMRA SEPGWTYLQM LLPQPELPAM QALRDHWGDD
LLWHLELVKQ QGSVRVAALP LVRWRGAALL EQLMDDCRAH GAVVFNPHVI TVEDGGLGVV
DGDQVSAKQR FDPDGLMNPG KLRGWLERAQ NS