Gene Syncc9902_1496 details

Gene Information

• Locus tag: Syncc9902_1496
• ID: 3741848
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1448047
• End bp: 1450068
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637771682
• Product: NHL repeat-containing protein
• Protein accession: YP_377498
• Protein GI: 78185063

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCAGT TCAAAACATT GAATCGTGGA CTGCTGATCG CAGGTCTGGG CATCAGCCTT 
GCTGGATTCG GGGGCGAGCA AAGGGCAGAA GCCAGCATTC GCAACAAAGT GCGCGGCACG 
GTCTCGGTGA TGGGCAAGCC TGTTGCAGAC GCCTCCGTCA CCCTCTGGAC AACAAGGGGC 
GGGCAGAAGC CTCAACAAGT CAAGGCGATT CGTTCCAAAA AAGACGGAAG CTTTGCGGTA 
TCCGTCAAAC CAAAAGACGG AACCATTCAC TACCTCATCG CCTCTGGCGG GACAGTCAAC 
AAGTCAAATG TTGATCGCCT CAGCATGCTC ACTGTTCTTG ACGAAACAGT GAATGGAGAA 
GTAGCGATTA ATGAACGAAC AACCGTGGGC TCCGTCTGGC CTAATGCTCA GCAATTAAAG 
GGCAATCAAC TCATTGGCAG CAAGAATGCT TTAGCGATTG GATCTGGACA CGTCAGACAT 
TTAGTTGATC AGAGCACAGG GCAATTCGGA AAAACTTTGC TCAATGGATT CAATTTACTG 
AGCTCAGAAA CCGCTGCCCG CGTCAACGTT CTTTCCAACC TATTAGCACT TTGTGGAAAC 
GCAAATCAAG AAAAGGGCTG CACACAACTT CTCGAACTAA CAGGAACCGA GAACAGCCTT 
GATGCGATGA CAAGCATTGC AAAATTACCG TGGAAAAATA CAGAAAGATT ATACAAATTA 
TTCGACAAAA ATTATCCACT GAACAACAAC AATGAAAGAA GAGCGATCGC ATCACTTCCA 
TACCTGCTGT TTCAACCAGA AAGTTTTTCC TTGTCAATCA GGTTTCAAGG TGGTGGTGCG 
TTAGCCCTTG GGAAATTGGG CTTTGACCAA AAGGGACACC TGTGGAGCGG TGCCAACTGG 
ATGCCCGGAT CGCAATCAGG TGTGGTCAAC AGCATTGGTG GTGGCATGAC GCACTTCGAC 
CAAACAGGTA CAGCGCAATC ACCGCCAATC ACCGGTTACA ACGGGCAGGG CCTCGATGGC 
GTTGGCTGGG GAACGGGCAT TTCAGAAAAA TATGCATGGG TGGGCACGTT CAACAACAAA 
GTTGGCGTGT TTGACCTCAA AGATGGACGA GCTCTTGGGC CAGCGACGAT TGATCAAGAG 
GTTGGTCAGC TCCAAGGGAT TGGAACATCT AAAAATGGTG ATGTCTGGAT CGCAGACAAC 
ACCAGTAATT ACATGATTCA GTTTCCCGAC GGTGATTTCA CAAAAGGGAA ACGACTCTCA 
TTCGAAGGGC TTCAAGCCCC ATTTGGTGTT GCGGTCGATA ATCAAAATCG GGTTTGGGTG 
ACGAGCAGCT TCAACAACAA GCTCACAGTG ATTGAAGGTG ATTCACCTGA TCAATACAAA 
ACAGTCACAG TGGCACTTGG AGCCCGTGGC CTTGCGATTG ATTCCAAGGG CAACGCCTGG 
TTATCGCAAC AATCCAATTC ACCCACAGGT GCACTTCCTG CCGGTGCCGT CATGCCACCT 
GGAACACCAA ACCCACCTCA ACAGCCCAAG ACAATTATGG AAGAGTTCGA GGCTGGTGCT 
GCCTTTGCTG CAGTCAATCC TGGGCTTAAA ACCCTAGGAA ATCTTGCCTT AATTTCTCCT 
GATCTGGAGA TTATCAAAAA TGGAATCGCT GGCGATGTCG CCTTCGTGCC GTGGGGTGTG 
ACGATTGACG GAAACGACAA TGTTTGGGTT GGCAACCTTT ACGGCCAAAG TCTGATCCAC 
ATCTGTGGAA CGGACCCATC CACGTGTCCT GAGGGAAAAA CAACCGGCGA CGTAATTCAT 
AATTATCAAA GCGGAGTCAT CCAAGTCACA ACAGATGTTG TTGTTGATGA TGCTGGCAAC 
ATCTGGAGCG CCAACAACTG GTACGACGCT GATGTCGTGA TTAATAAGAA CTACAATCCC 
CGCACATCAA CCTTCCCAGG AGGGCAAGGC CTGGTGGTGA CATATGGCGT AGCATCACCT 
GTACAAAATC CTCTTATGGG TGCAGTTCGA AAGGCACTTT AA 

 

Protein sequence

MNQFKTLNRG LLIAGLGISL AGFGGEQRAE ASIRNKVRGT VSVMGKPVAD ASVTLWTTRG 
GQKPQQVKAI RSKKDGSFAV SVKPKDGTIH YLIASGGTVN KSNVDRLSML TVLDETVNGE 
VAINERTTVG SVWPNAQQLK GNQLIGSKNA LAIGSGHVRH LVDQSTGQFG KTLLNGFNLL 
SSETAARVNV LSNLLALCGN ANQEKGCTQL LELTGTENSL DAMTSIAKLP WKNTERLYKL 
FDKNYPLNNN NERRAIASLP YLLFQPESFS LSIRFQGGGA LALGKLGFDQ KGHLWSGANW 
MPGSQSGVVN SIGGGMTHFD QTGTAQSPPI TGYNGQGLDG VGWGTGISEK YAWVGTFNNK 
VGVFDLKDGR ALGPATIDQE VGQLQGIGTS KNGDVWIADN TSNYMIQFPD GDFTKGKRLS 
FEGLQAPFGV AVDNQNRVWV TSSFNNKLTV IEGDSPDQYK TVTVALGARG LAIDSKGNAW 
LSQQSNSPTG ALPAGAVMPP GTPNPPQQPK TIMEEFEAGA AFAAVNPGLK TLGNLALISP 
DLEIIKNGIA GDVAFVPWGV TIDGNDNVWV GNLYGQSLIH ICGTDPSTCP EGKTTGDVIH 
NYQSGVIQVT TDVVVDDAGN IWSANNWYDA DVVINKNYNP RTSTFPGGQG LVVTYGVASP 
VQNPLMGAVR KAL