Gene Syncc9902_1455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1455 
Symbol 
ID3743531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1414174 
End bp1415874 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content44% 
IMG OID637771645 
Producthypothetical protein 
Protein accessionYP_377463 
Protein GI78185028 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCCC ATGAAAAGCA GTTATCAAGT TCAGGTATCA CGTCGTTTCA AGAGTTCATC 
CGACATGCCG ACTATTCATT CAGAACAAAT TTAAGCGCTG ATCCCGCCTC TACGGATGAT
GGCAATGATC ATCGGGCTCG AGAAGTCTGT TCGGGACATT TTGTACCCGT CAATCCAACT
CCTCTCACGG ATCCGGTCTA CATCACGCAT AGTTATAACT TTTTTGAGGA GCTTGGTCTT
CAAGATGAGC TGATTAAAGA TCATGATTTT ATAAAAATGT TTTCTGGAGA TCTCGCCTCG
ATCAACTCTC CTCAATGCAT CGGTTGGGCG ACTGGGTATG CCCTATCAAT TTATGGGACT
GAATATAATC AACAATGTCC ATTTGGAACT GGAAATGGCT ACGGAGATGG GCGAGCAATC
TCAGTTTTTG AAGGCCTTTT AAATCAAAAG CGCTGGGAAA TGCAACTAAA AGGCAGTGGC
CCAACGCCCT ACTGTCGAGG CGCCGATGGA CGTGCCGTAC TTCGATCAAG TGTGCGCGAA
TTTTTGGCTC AAGAATTAAT GCATGCCCAA GGAATTCCCA CGACACGATC ATTGACGCTA
TTTGCCTCGC AATCACAAAC AGTGATGCGT CCCTGGTACT CAGAGCAATC CCAATCTCAG
GACCCTGATG TTTTAGTGGA TAACCCCATA GCAATTAGCA CAAGGGTTTC ATCTTCATTT
CTACGTGTTG GGCAGTTGGA GTTGTTTGCA CGTCGAGCCC GACTCGATGC CCATCCTCAA
GCTTTCGATG AATTAAAAAT GATTGTTATG CATTTAATCG AACGAGAGTA CAAAAATGAA
ATTGATCAGT CGCTTCATTT TGCTGACCAG ATCGTTTTAT TGGCTCGTAC ATTTCGTGAA
CGTCTTTGTT CCTTAGTCTC TAACTGGCTA CGAGTTGGTT ACTGCCAAGG TAATTTCAAC
AGTGATAATT GTGCAGCAGG CGGATTCACC CTTGATTATG GACCGTTTGG CTTCTGCGAA
CTTTTTGACC CGCAATTCCA ACCATGGACT GGTGGTGGCG GACATTTTGC CTTCTTGAAT
CAACCAGTGG CTGCGGAAGC AAATTTCCAT ATGTTTTGGA AATCTCTAAG GCTTTTGATT
CTTGATAATG ATAAAAATCT TGAGGAATTA GATCAAATCC GCAAAGATTT TGAATTACAT
ATGCAAGCAA AGCTGCAGGA TATGTGGTCT AAAAAGCTGG GATTGCCTCA ATATGACCGG
CAGCTCTGCG ATGGGTTATT GCAATTACTT GAACTTTCGA AGGTAGACTT CACAATCTTT
TTCCGTGAGC TGTCGCATTT ACCGACTGAT TTCTCAGCTC TAAACAAAAG TTTTTACACG
CCTCTTCCTA AGCAGCTAGA GGTGCAATGG CAATCTTGGT TTGATCAATG GCATCTGTTG
ATTGCCAGCA CCAACAATCA ACAGGCTATA TCTCAAAACA TGCTAAAAAT CAATCCCAAA
TACACTTGGC GAGAGTGGCT CATTGTTCCA GCCTATGAAC AAGCAAGTCG CGGAGACTAT
TCGTTAATCC ATCAGATCCA GGCCATCTTA AATCAACCCT ATGAGGAACA AACTCAAACC
ATTGAAGATC AATATTACCG CTTACGCCCA AACTCATTCT TCTATGCAGG TGGGGTCTCC
CATTACAGCT GTTCTTCATA A
 
Protein sequence
MSSHEKQLSS SGITSFQEFI RHADYSFRTN LSADPASTDD GNDHRAREVC SGHFVPVNPT 
PLTDPVYITH SYNFFEELGL QDELIKDHDF IKMFSGDLAS INSPQCIGWA TGYALSIYGT
EYNQQCPFGT GNGYGDGRAI SVFEGLLNQK RWEMQLKGSG PTPYCRGADG RAVLRSSVRE
FLAQELMHAQ GIPTTRSLTL FASQSQTVMR PWYSEQSQSQ DPDVLVDNPI AISTRVSSSF
LRVGQLELFA RRARLDAHPQ AFDELKMIVM HLIEREYKNE IDQSLHFADQ IVLLARTFRE
RLCSLVSNWL RVGYCQGNFN SDNCAAGGFT LDYGPFGFCE LFDPQFQPWT GGGGHFAFLN
QPVAAEANFH MFWKSLRLLI LDNDKNLEEL DQIRKDFELH MQAKLQDMWS KKLGLPQYDR
QLCDGLLQLL ELSKVDFTIF FRELSHLPTD FSALNKSFYT PLPKQLEVQW QSWFDQWHLL
IASTNNQQAI SQNMLKINPK YTWREWLIVP AYEQASRGDY SLIHQIQAIL NQPYEEQTQT
IEDQYYRLRP NSFFYAGGVS HYSCSS