Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1455 |
Symbol | |
ID | 3743531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1414174 |
End bp | 1415874 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637771645 |
Product | hypothetical protein |
Protein accession | YP_377463 |
Protein GI | 78185028 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCCC ATGAAAAGCA GTTATCAAGT TCAGGTATCA CGTCGTTTCA AGAGTTCATC CGACATGCCG ACTATTCATT CAGAACAAAT TTAAGCGCTG ATCCCGCCTC TACGGATGAT GGCAATGATC ATCGGGCTCG AGAAGTCTGT TCGGGACATT TTGTACCCGT CAATCCAACT CCTCTCACGG ATCCGGTCTA CATCACGCAT AGTTATAACT TTTTTGAGGA GCTTGGTCTT CAAGATGAGC TGATTAAAGA TCATGATTTT ATAAAAATGT TTTCTGGAGA TCTCGCCTCG ATCAACTCTC CTCAATGCAT CGGTTGGGCG ACTGGGTATG CCCTATCAAT TTATGGGACT GAATATAATC AACAATGTCC ATTTGGAACT GGAAATGGCT ACGGAGATGG GCGAGCAATC TCAGTTTTTG AAGGCCTTTT AAATCAAAAG CGCTGGGAAA TGCAACTAAA AGGCAGTGGC CCAACGCCCT ACTGTCGAGG CGCCGATGGA CGTGCCGTAC TTCGATCAAG TGTGCGCGAA TTTTTGGCTC AAGAATTAAT GCATGCCCAA GGAATTCCCA CGACACGATC ATTGACGCTA TTTGCCTCGC AATCACAAAC AGTGATGCGT CCCTGGTACT CAGAGCAATC CCAATCTCAG GACCCTGATG TTTTAGTGGA TAACCCCATA GCAATTAGCA CAAGGGTTTC ATCTTCATTT CTACGTGTTG GGCAGTTGGA GTTGTTTGCA CGTCGAGCCC GACTCGATGC CCATCCTCAA GCTTTCGATG AATTAAAAAT GATTGTTATG CATTTAATCG AACGAGAGTA CAAAAATGAA ATTGATCAGT CGCTTCATTT TGCTGACCAG ATCGTTTTAT TGGCTCGTAC ATTTCGTGAA CGTCTTTGTT CCTTAGTCTC TAACTGGCTA CGAGTTGGTT ACTGCCAAGG TAATTTCAAC AGTGATAATT GTGCAGCAGG CGGATTCACC CTTGATTATG GACCGTTTGG CTTCTGCGAA CTTTTTGACC CGCAATTCCA ACCATGGACT GGTGGTGGCG GACATTTTGC CTTCTTGAAT CAACCAGTGG CTGCGGAAGC AAATTTCCAT ATGTTTTGGA AATCTCTAAG GCTTTTGATT CTTGATAATG ATAAAAATCT TGAGGAATTA GATCAAATCC GCAAAGATTT TGAATTACAT ATGCAAGCAA AGCTGCAGGA TATGTGGTCT AAAAAGCTGG GATTGCCTCA ATATGACCGG CAGCTCTGCG ATGGGTTATT GCAATTACTT GAACTTTCGA AGGTAGACTT CACAATCTTT TTCCGTGAGC TGTCGCATTT ACCGACTGAT TTCTCAGCTC TAAACAAAAG TTTTTACACG CCTCTTCCTA AGCAGCTAGA GGTGCAATGG CAATCTTGGT TTGATCAATG GCATCTGTTG ATTGCCAGCA CCAACAATCA ACAGGCTATA TCTCAAAACA TGCTAAAAAT CAATCCCAAA TACACTTGGC GAGAGTGGCT CATTGTTCCA GCCTATGAAC AAGCAAGTCG CGGAGACTAT TCGTTAATCC ATCAGATCCA GGCCATCTTA AATCAACCCT ATGAGGAACA AACTCAAACC ATTGAAGATC AATATTACCG CTTACGCCCA AACTCATTCT TCTATGCAGG TGGGGTCTCC CATTACAGCT GTTCTTCATA A
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Protein sequence | MSSHEKQLSS SGITSFQEFI RHADYSFRTN LSADPASTDD GNDHRAREVC SGHFVPVNPT PLTDPVYITH SYNFFEELGL QDELIKDHDF IKMFSGDLAS INSPQCIGWA TGYALSIYGT EYNQQCPFGT GNGYGDGRAI SVFEGLLNQK RWEMQLKGSG PTPYCRGADG RAVLRSSVRE FLAQELMHAQ GIPTTRSLTL FASQSQTVMR PWYSEQSQSQ DPDVLVDNPI AISTRVSSSF LRVGQLELFA RRARLDAHPQ AFDELKMIVM HLIEREYKNE IDQSLHFADQ IVLLARTFRE RLCSLVSNWL RVGYCQGNFN SDNCAAGGFT LDYGPFGFCE LFDPQFQPWT GGGGHFAFLN QPVAAEANFH MFWKSLRLLI LDNDKNLEEL DQIRKDFELH MQAKLQDMWS KKLGLPQYDR QLCDGLLQLL ELSKVDFTIF FRELSHLPTD FSALNKSFYT PLPKQLEVQW QSWFDQWHLL IASTNNQQAI SQNMLKINPK YTWREWLIVP AYEQASRGDY SLIHQIQAIL NQPYEEQTQT IEDQYYRLRP NSFFYAGGVS HYSCSS
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