| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1384 |
|---|
| Symbol | |
|---|
| ID | 3742515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1344950 |
|---|
| End bp | 1349329 |
|---|
| Gene Length | 4380 bp |
|---|
| Protein Length | 1459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637771568 |
|---|
| Product | putative multicopper oxidase-like |
|---|
| Protein accession | YP_377392 |
|---|
| Protein GI | 78184957 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.294335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCA ATTATATTAT CGGCAGTTTA TTTCCAAAAA AAACTGATGG CAGTCCCAAC
ATCAAATACT CTTCAAGCTT GGTAGCTAAA GGGACAGGAT CAAACATCAG GCTTAGCAAT
AAAAGAAGAC GAAATCAATC CTATAAAAAC AAATTAGTTG CCAATATTGA TATCACAAGT
GATCCAATCA ATATCAAAGG ATCTTCGAAT TTCGCCAAAG AATGGTTGAT ACCGCAAATC
ACAAATAAAA CAAAGAGTGA TGGATCAATC AATTCCTCAT CAATTTTTGG AGCAGTACAA
AAAAAAGTCG TTAGCAAGTG GACAAAGCAG CCAAAAAATC AGTCGATGAA AAGTCTGATC
ATGCTCGGTT ATATTGGACC TGGCTCGAGT GAAAGTGCTA CAAATAATTC AACGTGGAAT
TCAGTCGGCT CTAAAAAAGA TAAATATTAT CAAGCAATAC AGGACTTGGG CAACTATGAT
CCAAGAAAAA TGTGGGCTAA TTATAATAAC AATTCTGTAG ATGCTGATGT TATCAAGTCT
GACTACGACG AAAGAAATCT CCTGCAAAAT CTCAATGCAG AAAAATTGCA ACTTGAGGAA
GGTACTAATC CGAATCTCTG GTATCCAGCA ATGCTTTATA GCTACGGCTT GCGTGGAGAA
GGAACAAGTT ATCCCGGACC AGTTTTAATT ACGCAACCTG GCGATCAGAT CCGACTCAAT
TTCAACAACG ACATACGAAT TGGAGAGTTA AATAATTCAC AAATTCAGCA AGCAACTCTT
GTCCCAAATA GCACCTATGG AAATGGTGCA AGTGATGGAC TTGGAGGAAC GACATCTCTT
AATTATCACC TCCATGGATC TCACACCAAT CCCACTGGAT TTGGGGACAA CGTAGTTTCG
AGATTTACGA CAGGGCAGAA ATGGACAACC ATTATTGATT TACCAGAAGA TCATGGACAG
GGTTCTTATT GGTATCACCC GCACTACCAC CCCTCTGTTA ATCAACAAGT CTACGGGGGT
GCATCAGGTT TCATGCAAGT AGGGGATCCA TTAAGCAAGA TACCTGCTTT TAAGGATATT
CCACGAAATC TAGCTGTTCT AAAAATGCTA GATATTGGAA TCGATACTGA TACTGGATCA
TTACAACTAG CGGCCTACGA CAATTACGGA GGTCCGCTTA CCAATGCCAT GACAATGGTG
ACGGTGAATG GTGAATTTCA GCCAGAAGCC GATGCAGGGA AAGGGGGATG GCAATCAATT
ACTTTCAGCA ATCAAGCTAA TCAAGCTTTC TACAATGCTA GCCTTATTCA TCAGGAAACT
GGAGAAAGAC TCCCTTTATA TATCTATGGC GAAGATGGAC ATCAATTCCC AAAAATACGA
GCGGCTAAGG GGACACTAAC AACCACAGAC GATCCAGAAA CATCTCTTCC TACGGAGTAT
AAGCAGCAGG AGAATGTCAT CTCGCTGGCA CCTGGCAAAC GGGTTGATGT TCTGGCTTAT
CTTCCAGGGG GAACAACTGA GATCGTCTCT AACTATACAT TTTCGGATGA TTCGGGCAAT
ATATTTAAAA CTGAAAATAT GGGTGATTAT CCAGACCTAA GCACAACAGC CAAGGATCTT
AAGAGCGTCA CGAATGGTCA AAGTGCGGGC CCAATGGCAA CTTTTGTTGT TAACAAAAAG
ACAAAACTGC CATCACTTGG AAAACTCAAT CGTGATATAA GAATTGCCAA CAAAGGGATT
GAAGTTCAAA AGATCAAACC ATCAACAAAG CCTGAGGATT ATGATACAAA TGCTGTTCCA
AGCATCAATT TATTTGATTC GAAAAAATCA AAATGGAAAC CTCTACGAAA AAGAGAATTT
AATTGGGCCA AAGGAGTGCT TGTTGGTGAC AAGGATGAGT GGGATCTAGC TACGCAAGAA
CGAGTATCTG ATTACAATAG CTCAGCAGAC GTTAACAATC AGTTTGAACA ATACGATGCT
CTTTCAAAAA TTACAAGCGG CTCTAACAAC TGGTTTGGAT ACAATAATCC ATTTCTAATT
AATGATCATG TTTTTCCAAA TGGTTCAATA ACAATCGCCC AACTTGGGAC AATGGAAGAA
TGGAACCTCC GCAATTGGAG TGTCAATGGA GGGACTAAAT ATATTGGGCA TCCTTTTCAT
ATTCATATCA ACGACTATCA GACAAAAAAT AGCGACACTG AGCTTGACAA AAAAAGGAGC
CTAGAAGATG TTACGATGCT TAACTCTTCA GGGTATAAGT ATTACGATAC CGATTTAGAA
AAGAATGTAG AGCTAAAACC ACTTCAAGGA AGGTTTCATG AAATCAGTGC TGCATTAGAC
AAAAATAAGG TCGATTCAAT TGGCACCTGG GGCGCCAATG ATCAAACTGT TAGAATGCTA
TTCCAAGACT ATCTTGGGAC ATATGTTTTT CATTGCCACA TACTTCCTCA TGAAGATGCT
GGAATGATGC AGGTTATTAC GATTGTCGAA AATACCGATA GTAGCTGGAT TACAAACGCA
GAATCTGACA ACTATACAAA TAAGGATGGG AATATTACCT TACGTCAAGC ACAGGACTTT
AGTGAGCGCA CACTAAAACC TGAGAATTCA AAATTTAAAA TTGATAGGAT GCAATCTGGT
GATTTAAACT ACGATTTCAC GCAAGATATA GTTTTAAGCC GTAGAGGCTC CAACTCTTCA
TCGGGTCATT TAGAAATTTA TGATGGCGCT GCTGCATTAA AGAATAAAAC GACACTCTTG
AGTAAAATTA AACCCTACAA ATCAAAATAT GCTCCCTGGG CGTTTATTGA AGACTTCACG
GGTGATGGCA ACCGCGATCT AGTTACGGCT GGGTTTTCTA AATCAAAGGC CGGCAACATC
AATCTTCAGG ACCTTCAAAT TAAAGCCTGG ACTTCCTCAA AGACTGCAAA ACAATGGAAA
AATGTTTTTG ACTTCAATCC GTTTGCCGAT ATCAGTACAA TTATCAACGT TGATGATCAA
GAATTAAAGC CAGTAGACGG ATTAGATATT AATCAGGTTG GTGTTGCAAT GGCTGACATG
AATTTGGATA ACTTCCAAGA TATAGCGGTC AGCTATGCCG TAGACAGTGG ATTGAGAGTT
GTTGTTTTGG ATGGTGCAGC AATGGCATTA AACTATCAAA CAGGAACCAT GGAGGGTGGA
TATTTTCCCA ATGATAATGT GCTTGCTGAT GCTGTTATTC AAGACAAGAG CCTTCAAGAT
CTAAGCAAAG TTGTTTTAAC TTCTGGCTTT AGTAGTTACG CGCAATCAGC ATTGGAAGAC
CTAATTATCA CAACCCATTC TGAATCCAAC AAAACAAAGC AGGTCTTCAC TACTCAATTG
CAAGCTGGTC ACTTTATTGC CACTTCAGAG ATGGAGTCGT CCATGGATGG AAGCACCCAT
AGTGGTCATG GAGCCATGGT CATGAAGGAC GATCGCATTG AGAATCTTCG TCACAACTCA
ATGCCTCTCT CCATTACTGA AACTGATCTT TATAGCGAAT CAGGGCTTGC TACAACACCA
GTCATTGCAG GTGTATTTGG GACCACCGGA TTAATAACTG ATGATCAATT AGTGATTGCA
CAAGGAGTCA GTAATGGAAA ATACAGCTAT GGAAATTCAG CTAGCAGCAA GGATTTATTC
AATTCATCTC AACAGCTAGC TTTTAATCTT AATCAAATCA ATAAGACAAA TAGAACTGAT
TTAATTGGTG CCATAGACTC AGAGTTGTCA ACTACATTCA AAGCAAAAAG CACTCAAAAA
AGAATCAATA TGGCAAATTT AACGTATCAA GTTTATGCCA ATCAAACCAT GGCACCTGGC
GATCTTGCGA CTGCCGCCGG AGCCATTCTT GGCCAAGGGC AAACAGCACA GCAGCTTGCT
GAAGACCTCA TCAATAATCC AAAATCTTCT AAATTAATTA CAGCTAGCTA TGGCGGTTCA
CTGAGCACAT TGCCGATCGC TGATGTTATT ACCGGAGCGA CAAAGAACCT TTATGGGAGA
ACCGCTACGA AGGGAGAAAT ACGCAAATGG AGTAATGCTG TGAAGAGCGG ACTTGATCAA
AGTTTGATTC CTCTATCTAT TTTACAGAAC ACAGGCGATG ACGACATTTA TCGCACAGCA
TTGATGTCTT CAATAGCGCA ATGGAATCAA GTTCAATGGA GCACAAATGC CAACCAGATG
GGATCCTTTG GTCAAGGTCT TCAAAGCGAT GAAGCTCGCT TTCAAAGCAT CACTTCACCC
CTTGATGCAA TTGGTAGTCT CAGCAATTGG AGGGCTGTAA TGGAAGAGAT GACGTCTTAT
ACCCAGACGG CCCTCAACAC CTTGATAGGC ACAGATATCT CAAAGTCGGG CTTCTTCTAA
|
|---|
| Protein sequence | MAVNYIIGSL FPKKTDGSPN IKYSSSLVAK GTGSNIRLSN KRRRNQSYKN KLVANIDITS
DPINIKGSSN FAKEWLIPQI TNKTKSDGSI NSSSIFGAVQ KKVVSKWTKQ PKNQSMKSLI
MLGYIGPGSS ESATNNSTWN SVGSKKDKYY QAIQDLGNYD PRKMWANYNN NSVDADVIKS
DYDERNLLQN LNAEKLQLEE GTNPNLWYPA MLYSYGLRGE GTSYPGPVLI TQPGDQIRLN
FNNDIRIGEL NNSQIQQATL VPNSTYGNGA SDGLGGTTSL NYHLHGSHTN PTGFGDNVVS
RFTTGQKWTT IIDLPEDHGQ GSYWYHPHYH PSVNQQVYGG ASGFMQVGDP LSKIPAFKDI
PRNLAVLKML DIGIDTDTGS LQLAAYDNYG GPLTNAMTMV TVNGEFQPEA DAGKGGWQSI
TFSNQANQAF YNASLIHQET GERLPLYIYG EDGHQFPKIR AAKGTLTTTD DPETSLPTEY
KQQENVISLA PGKRVDVLAY LPGGTTEIVS NYTFSDDSGN IFKTENMGDY PDLSTTAKDL
KSVTNGQSAG PMATFVVNKK TKLPSLGKLN RDIRIANKGI EVQKIKPSTK PEDYDTNAVP
SINLFDSKKS KWKPLRKREF NWAKGVLVGD KDEWDLATQE RVSDYNSSAD VNNQFEQYDA
LSKITSGSNN WFGYNNPFLI NDHVFPNGSI TIAQLGTMEE WNLRNWSVNG GTKYIGHPFH
IHINDYQTKN SDTELDKKRS LEDVTMLNSS GYKYYDTDLE KNVELKPLQG RFHEISAALD
KNKVDSIGTW GANDQTVRML FQDYLGTYVF HCHILPHEDA GMMQVITIVE NTDSSWITNA
ESDNYTNKDG NITLRQAQDF SERTLKPENS KFKIDRMQSG DLNYDFTQDI VLSRRGSNSS
SGHLEIYDGA AALKNKTTLL SKIKPYKSKY APWAFIEDFT GDGNRDLVTA GFSKSKAGNI
NLQDLQIKAW TSSKTAKQWK NVFDFNPFAD ISTIINVDDQ ELKPVDGLDI NQVGVAMADM
NLDNFQDIAV SYAVDSGLRV VVLDGAAMAL NYQTGTMEGG YFPNDNVLAD AVIQDKSLQD
LSKVVLTSGF SSYAQSALED LIITTHSESN KTKQVFTTQL QAGHFIATSE MESSMDGSTH
SGHGAMVMKD DRIENLRHNS MPLSITETDL YSESGLATTP VIAGVFGTTG LITDDQLVIA
QGVSNGKYSY GNSASSKDLF NSSQQLAFNL NQINKTNRTD LIGAIDSELS TTFKAKSTQK
RINMANLTYQ VYANQTMAPG DLATAAGAIL GQGQTAQQLA EDLINNPKSS KLITASYGGS
LSTLPIADVI TGATKNLYGR TATKGEIRKW SNAVKSGLDQ SLIPLSILQN TGDDDIYRTA
LMSSIAQWNQ VQWSTNANQM GSFGQGLQSD EARFQSITSP LDAIGSLSNW RAVMEEMTSY
TQTALNTLIG TDISKSGFF
|
|---|
| |