Gene Syncc9902_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1366 
Symbol 
ID3742870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1322297 
End bp1323073 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content43% 
IMG OID637771550 
ProductABC transporter 
Protein accessionYP_377374 
Protein GI78184939 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.895775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGAAA CTCAACTTTG GTGGCTTCTT CCACTTATCT TATCTCTATT AATTGGTATA 
ATCTGTCCAG CAACAGGATC ATTACTGATC ACCCAACGAC GCATACTGCT AGCCAATTTA
ATGGCTCATT CAGTACTGCC AGGTTTAGTA ATAGCCTTAG CAATTGGCAT TGACCCAACA
GTCGGTGGTT TAATCAGTGG ACTACTTGGT GCCCTAGTAG CAGAACGGCT TAATCAGAGG
TTTAAGGGTA GAGAAGAGTC GTCGATGAAT ACTGTCTTAG CAGGCTTTAC GGCTCTTGGA
GTACTTCTGG TACCACTACT TCAAACCAGA GTTGATCTTG AAACCATTCT ATTTGGTGAT
CTTCTCGCTG CAAGTGGTAG TGACTTAACC CGAACCTTGG TGGCAACATT TGCACTGGCC
TTATTACTAA TTACCCGCTA TCAAGATTTA GTATTTATTG GTGTAGATCC TGATGGGGCC
TATGCAGCCA AGCGACCGGT AACACAAATT CGATTCATAG CAATTGTTAT AACAGCATTA
GTCATCATCA GTGCCATAAC TGCAGTAGGA ATCATACTTG TCATTGCTTT ACTTTGCGCA
CCAGTTCTGA TGCACATCGA AAAAAGTACC AGCCTTAAAC AATTAATGGT GAAGTCAGCT
GCCACTGGCT TGGCATTAAC AAGTGGGGGA ATGATGCTCG CAATTGCTGT CGATCTACCT
CCAGGGCCAG TGATCGGAAG CCTCTGCATG GTTGCTCTTA TTTTAAAAAG ATTCTGA
 
Protein sequence
MDETQLWWLL PLILSLLIGI ICPATGSLLI TQRRILLANL MAHSVLPGLV IALAIGIDPT 
VGGLISGLLG ALVAERLNQR FKGREESSMN TVLAGFTALG VLLVPLLQTR VDLETILFGD
LLAASGSDLT RTLVATFALA LLLITRYQDL VFIGVDPDGA YAAKRPVTQI RFIAIVITAL
VIISAITAVG IILVIALLCA PVLMHIEKST SLKQLMVKSA ATGLALTSGG MMLAIAVDLP
PGPVIGSLCM VALILKRF