Gene Syncc9902_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1258 
Symbol 
ID3743062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1221227 
End bp1221703 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content57% 
IMG OID637771438 
Productlipoprotein signal peptidase 
Protein accessionYP_377266 
Protein GI78184831 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGG TGCTGCAACG ATCCACAACC TTGTCGATTG CTGCAGCCAT CGTGCTGATC 
GATCAGCTGA GTAAGGCCGG ACTGTCGGAG ATCTTGGTTG ATGGAAGATC GATTCCCGCC
ATCCCAGGGA TCCTCTCTCT GCAACTGGTT CACAACAGCG GCGCTGCCTT CAGCCTGTTC
AGCGGATCCA CAGAATTCCT AGGGCTGCTC AGCCTATTGG TGAGTTTGGG AATCTTGGTC
TGGATTGGGC GACAGCGTGC GATACCTCTT TGGCAAGGCC TAGCGACGGC ATGCCTGTTG
GGCGGAACGC TTGGCAATGG CTTAGACCGC TGGCGCCTTG GCTACGTGGT GGACTTTCTC
GCGCTCGTGC CGATCAACTT CCCCATTTTC AACGGCGCCG ATATCGCGAT CAATCTTGCG
GTGCTGTGCT TCGTTTTGGA TCTCTGGCTC AACCGCCATG ACGGGGAGCA TGGTTAA
 
Protein sequence
MSRVLQRSTT LSIAAAIVLI DQLSKAGLSE ILVDGRSIPA IPGILSLQLV HNSGAAFSLF 
SGSTEFLGLL SLLVSLGILV WIGRQRAIPL WQGLATACLL GGTLGNGLDR WRLGYVVDFL
ALVPINFPIF NGADIAINLA VLCFVLDLWL NRHDGEHG