Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1227 |
Symbol | glgC |
ID | 3742681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1186283 |
End bp | 1187578 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637771407 |
Product | glucose-1-phosphate adenylyltransferase |
Protein accession | YP_377235 |
Protein GI | 78184800 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0448] ADP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAG TTCTGGCGAT TATTCTTGGC GGCGGTGCTG GTACCCGCCT CTATCCCCTT ACCAAGATGC GGGCGAAGCC TGCAGTTCCT CTGGCAGGTA AATATCGACT GATCGATATC CCCATTAGTA ACTGCATCAA CTCCGACATC CACAAGATGT ACGTGATGAC GCAGTTCAAC AGCGCATCGC TGAATCGTCA TTTAAGCCAA ACATTTAATC TCTCTAATTC CTTCGGTGGA GGTTTTGTTG AAGTGCTTGC CGCTCAACAA ACTCCCGATA GCCCTTCTTG GTTCGAGGGA ACTGCCGATG CTGTTCGTAA ATATCAGTGG CTTTTTCAGG AATGGGATGT TGACGAGTAT TTAATCCTGT CCGGTGATCA GCTGTACCGG ATGGATTACA GCTTGTTCCT TGAACATCAC AGACGCACAG GTGCCAATCT CACCGTTGCC GCTCTTCCCG TTGATGCGAA GCAGGCTGAA TCGTTTGGAT TAATGCGCAC GGATAGTGAT GGAAATATTC AAGAGTTCCG TGAGAAGCCC AAAGGGGACT CCCTGCGGGA GATGGCTGTC GATACATCCC GATTTGGCTT GACTCCCGAA TCTGCTCAGG AGCGTCCCTA TTTGGCATCA ATGGGGATTT ACGTGTTCAG TCGCGACACC CTATTTGACC TGCTTGACAA GCATCCAGGC CACAAAGATT TTGGAAAAGA AATTATTCCC GAGGCGCTGA AGCGTGGGGA CAAGCTTCAA AGTTATGTCT TTGATGATTA CTGGGAAGAT ATTGGAACCA TTGGTGCTTT CTATGAGGCC AATCTTGCCT TAACTCAGCA ACCCACCCCA CCATTTAGTT TTTACGACGA AAAGTTTCCT ATTTATACCC GTCCACGCTA TTTACCCCCT AGTAAGTTAG TTGATGCTCA AATCGTTAAT TCTATTATTG GTGAAGGTTC TATCCTCAAA TCATGCAGCA TTAATCACTG TGTATTAGGG GTCCGGAGCC GTGTTGAAAC CGACGTTGTG TTGCAAGACA CTCTGGTGAT GGGCGCTGAT TTCTTTGAAT CGAATGAGGA ACGTGAAACT ATCCGTCAGC AGGGGGGAAT TCCTGTTGGT GTGGGCCCTG GCACAACTGT AAAGCGGGCA ATTCTCGACA AAAACACGCG TATCGGTTCA AACGTTTCGA TCATCAACAA AGATCATGTG GAGGAGGCTG ATCGGTCCGA CCTCGGCTTC TACATCCGTA ATGGAATTGT CGTTGTTCAG AAGAACGCCA CGATCCAGGA TGGAACCGTG ATTTGA
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Protein sequence | MKRVLAIILG GGAGTRLYPL TKMRAKPAVP LAGKYRLIDI PISNCINSDI HKMYVMTQFN SASLNRHLSQ TFNLSNSFGG GFVEVLAAQQ TPDSPSWFEG TADAVRKYQW LFQEWDVDEY LILSGDQLYR MDYSLFLEHH RRTGANLTVA ALPVDAKQAE SFGLMRTDSD GNIQEFREKP KGDSLREMAV DTSRFGLTPE SAQERPYLAS MGIYVFSRDT LFDLLDKHPG HKDFGKEIIP EALKRGDKLQ SYVFDDYWED IGTIGAFYEA NLALTQQPTP PFSFYDEKFP IYTRPRYLPP SKLVDAQIVN SIIGEGSILK SCSINHCVLG VRSRVETDVV LQDTLVMGAD FFESNEERET IRQQGGIPVG VGPGTTVKRA ILDKNTRIGS NVSIINKDHV EEADRSDLGF YIRNGIVVVQ KNATIQDGTV I
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