Gene Syncc9902_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1215 
Symbol 
ID3741807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1176201 
End bp1177043 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content41% 
IMG OID637771395 
Productinner membrane protein 
Protein accessionYP_377223 
Protein GI78184788 
COG category[S] Function unknown 
COG ID[COG3204] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTCGCA AGCTACAGCT CGAACTTCTT GAGCACCATC CAATCAGAGA TACAGCAAGC 
GGTCTGAATG AACCATCAGG CCTCGCACTC GATCGACAAG GAACAAGCTT TTATACCGTT
AGTGATGATA CAAAGATTAT TTTTAATTTA GACCTCCAGG GGAGGATTAT CCCTGATTCA
TCATTTCTTA TCAACATCAA AGATTTAGAG GGGGTCGCTG TTACAGCAGA CGACAAAATG
ATCCTAGCGG TTCAAGAGGA ATCAAATTCA ATCGTTCAAT TTGACATTAT CAGCAGGAAA
GAAATCCAAC AAATTCCGCT TAGAACTCTG AAGAACTACG ATCAAATTGC GGTGTACTTT
AATCATAAGA ATCAAAACAA AGGCCTAGAG GGGATCACTA TTAATTTCAA CAACAATCAT
ATATTTGTCG TCAAGGAGGG GGAGCCCGGC CTACTCATCG AACTAGATTC AAAACGCGAA
ACGATCATCA ACCATTGCAA GCTTAATGAA AAACATGGTT TCAAACATCC AAGAATTAAA
TCTGAAAAGC TCGATTTTTC AGGCCTAAGT TATGATTATA CCAGCGATAC AATTTGGATT
ACCAGTGACA AAGGAGAATG CCTCTTTCAT TTCAACTTTG TTGACAAGAA AGTTTTAAAC
CGCTTGGATC TACCCCGTGA GTCAGACACT CAATCCAAAC GCGTTGCCAA ATCGGAAGGA
ATTGCTTTTG ATCCCAACAA TCGGCGTCTT TACATTGTGA GTGAACGGGA CTGCGAGCTC
TACATTTATC AACTACATGA CCACAACGAA GCCGCTACGA ATTTTGATGA CGGGTGCCAA
TAG
 
Protein sequence
MTRKLQLELL EHHPIRDTAS GLNEPSGLAL DRQGTSFYTV SDDTKIIFNL DLQGRIIPDS 
SFLINIKDLE GVAVTADDKM ILAVQEESNS IVQFDIISRK EIQQIPLRTL KNYDQIAVYF
NHKNQNKGLE GITINFNNNH IFVVKEGEPG LLIELDSKRE TIINHCKLNE KHGFKHPRIK
SEKLDFSGLS YDYTSDTIWI TSDKGECLFH FNFVDKKVLN RLDLPRESDT QSKRVAKSEG
IAFDPNNRRL YIVSERDCEL YIYQLHDHNE AATNFDDGCQ