| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1189 |
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| Symbol | |
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| ID | 3743228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1153644 |
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| End bp | 1154018 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637771369 |
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| Product | putative type III sigma factor |
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| Protein accession | YP_377197 |
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| Protein GI | 78184762 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCTCA ATGCCCGTCA ACGCCATGAA GAGCGGCGCT GCTTACCGCC TGGCACCAAT
CAGCGAAATC AAAAGGTTCT TCAGCACTTG GGGTTGGCCC ATTGCGTGGC GATGCGTCAA
CGTCATCGTG GACCGGAAGA ACGGGACGAT CTCCTTCAAG AAGCCTGCCT TGGCTTGATT
CAAGGTCTGC AAAAGTTTGA CCCGTCCCGT GGCTTGCGCC CCAGCAGCTA CTTGATGAGC
CGAGCGAACG GCCAGGTTTT GCACTACCGG CGAGACCGAT CGCGCATGGT GCGCATTCCT
TGGCGACTCC AAGACCTTTA TGTCTCCGGT CAACGCCTGC AACAAGAACG GACGCAAAAG
GGTCACCTCC TCTGA
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| Protein sequence | MVLNARQRHE ERRCLPPGTN QRNQKVLQHL GLAHCVAMRQ RHRGPEERDD LLQEACLGLI
QGLQKFDPSR GLRPSSYLMS RANGQVLHYR RDRSRMVRIP WRLQDLYVSG QRLQQERTQK
GHLL
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