| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1162 |
|---|
| Symbol | |
|---|
| ID | 3742812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1129272 |
|---|
| End bp | 1129880 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637771342 |
|---|
| Product | aromatic acid decarboxylase |
|---|
| Protein accession | YP_377170 |
|---|
| Protein GI | 78184735 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
|---|
| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0326074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCTT ATGTTCTCGC TGTTACTGGT GCATCAGCAC AACCCTTGGC TGAACGAGCG
CTTCAGCTCC TCTTGGCGAA TGATCGGAAA GTTCATTTAG TGCTAAGTCG CGGAGCGCAT
GAAGTATTTC GCGCTGAGCA AGGACTTTCG ATCCCAGTCG ATCCAGAACA ACAAATTCCT
TTTTGGAGAG AACGTCTAAA GGTTGAGGAT GGCGAGCTCA TTTGCCATCG ATGGAATGAT
CAAAGTTCGT CGATCGCCAG TGGAAGTTAC CGAACGAAAG CCATGGTGAT TGTTCCTTGC
AGCATGGGAA CTGTTGGACG AATTAATGCT GGCATTGCCA CAGACTTGAT TGAACGATGT
GCCGATGTTC ATCTCAAAGA ACGGCGTCCC CTTGTGATTG CTCCAAGAGA AACTCCTTGG
AATTTGATTC ACCTACGCAA TCTCACTGCC TTAGCGGAGG CCGGAGCCAC GATTGCCCCG
CCAACCCCTG CTTGGTACAC CCAACCAAAA TCGTTGGACG ACATGGTGGA CTTTCTGGTC
GTTCGTTTAT TTGATGGCCT AGACGAAGAC CTGGCTCCAC TTCAGCGCTG GACTGGGCCG
ATTCAATGA
|
|---|
| Protein sequence | MHPYVLAVTG ASAQPLAERA LQLLLANDRK VHLVLSRGAH EVFRAEQGLS IPVDPEQQIP
FWRERLKVED GELICHRWND QSSSIASGSY RTKAMVIVPC SMGTVGRINA GIATDLIERC
ADVHLKERRP LVIAPRETPW NLIHLRNLTA LAEAGATIAP PTPAWYTQPK SLDDMVDFLV
VRLFDGLDED LAPLQRWTGP IQ
|
|---|
| |