Gene Syncc9902_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1142 
Symbol 
ID3743278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1110370 
End bp1111029 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content54% 
IMG OID637771322 
Producthypothetical protein 
Protein accessionYP_377150 
Protein GI78184715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACGT TCCTGCAGCA GTCCGCATCG ATGCCAACAC CGGCTCGGGT TGTTTTGTTC 
AGTGGGCTGC TCGTCCTGGT GTTGGCAGTG ACGAATGCAT CCACAGCTGA TCAGATCACA 
CCAGATCTTC AACGGGCAGA GGTTTTGGCC GGTTTGGCGG CGGTGGGGCT GATGTTGGTT 
GCTGTGCTGT GGACGAGGGC CAATCCTCGA TCAGCGGACC AGGTCGATCT CCAAGGGGAG 
CAGGGGCTCG TCATGGACGA ACAGAATTCA TCTGAACTTC GGGAGGAGTT GGGGTGGGGG 
AGTCACATGC TGCTGACCGC TACACCAGCG GCAACAGTGC TGGTGTACTG GAGAGGACAC 
GTCATCCTTC GTCGCGGCTT GATTCGAGCT GCCGCATTTG AACCAGCAGA CATTTGCAAT 
CGAGTCATGG AACGGGAAAC AACCATCTCG CTCGTGAACA CGGAGCTATT CCCAGGACGA 
AGCGAATTCG ACTCGGTTTT GCAAAATCTT CCAGCAGTTG TGATCTGTCC CCTAGGAAAA 
AATGGTGTTG TCGTTGTGGG TGGTTGGTCG AAACGTTGTT TCAGCCAATC CGATGAACGT 
TGGTTAGAGG GCTGGACCGA GAGACTTAAA ACGTCACTTG AGAAGAATCG TCCTGATTAG
 
Protein sequence
MITFLQQSAS MPTPARVVLF SGLLVLVLAV TNASTADQIT PDLQRAEVLA GLAAVGLMLV 
AVLWTRANPR SADQVDLQGE QGLVMDEQNS SELREELGWG SHMLLTATPA ATVLVYWRGH 
VILRRGLIRA AAFEPADICN RVMERETTIS LVNTELFPGR SEFDSVLQNL PAVVICPLGK 
NGVVVVGGWS KRCFSQSDER WLEGWTERLK TSLEKNRPD