| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1117 |
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| Symbol | |
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| ID | 3743077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1079133 |
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| End bp | 1080650 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637771296 |
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| Product | photolyase family protein |
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| Protein accession | YP_377125 |
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| Protein GI | 78184690 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.322412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGATTG GCGGGAGAAG ACGGATAACT GTGGAGATCA CTCTTGTTTA TCCGCATCAG
CTGTTTGCGG AGCACCCAGC CATTCAATCC GGTCGTTGCG TAGCGCTGAT CGAGGACCCG
CTTTTTTTTG GAACCGATCC TTCGTGGCCG ATCAAGGTTC ATTGCCAACG GTTGTTGCTG
CATCGTTTGT CGATGGCGGC CTATGCCGAT GACCTCCGGA ATAAGGGTTA TTCAGTGCAG
GTTCAGCGTC ATGACAGTGC TGTTGATACG AATGGTCATC TAGGGCTTCT TCACGCTGCT
GGTTATCGAC GGTTTCACGT AGCGGATCCT GTTGATCACC TTCTGGAAAA ACGTTTGAAA
GCATTCATAG ATGAAAATAA TTGTCATCTA GAGGTCGTAG ATACGCCTCT TCTTCTTACA
CCTCAGCTGG TTAGTGAGAA ACATTTTGGC AACGGGAAAA AACCGTTAAT GGCCAAATTT
TATGAGATGC AGCGCAAACG GTTAAATATT TTGGTCGATG CTGATGGTGC ACCCCATGGA
GGGCAGTGGA GTTTTGATGC CGATAACCGT AAGAAATTGC CCAAGGGAAT CACCGTTCCC
CTTGAACCGG CGTCTCCTCA ACAGATTGAT GTTGCCTCGA TATTGAAGCA GCTGAAACAC
GAACAGTTAC CTCTTCTTGG AAATGGAGAT CAATTCAATT ATCCAGTTAA TCATCAACAG
GCTGCTCTTT GGTTGGATCA ATTTCTGGAT GATCGATTCA AGGATTTTGG AGCCTATGAA
GATGCCATTA GTCGATACCA CCGAGTGATG TGGCATGGAG TTTTGACACC CATGCTGAAT
ATTGGCTTAT TGACACCGCG TCAGATCCTC GACCGTACCT TGGAGTACTC TAAGAAAAAT
GATATTCCTC TGAATTCTTT AGAAGGATTT ATTCGACAAA TTATTGGTTG GCGAGAATTT
ATGGCCGTGA TGTATCGCCG TCACGGGGTG GAAATGCGTA ACAGTAATTT TTGGGAGTTT
GAAGATCGCC CCATCCCTGA TGCGTTCTAT ACAGGCAATA CAGGATTGCC TCCAATTGAT
GACGCCATAA AGCACGCCTT GCAAACTGGT TATTGCCATC ATATTGAGCG ATTAATGCTC
GTTGGAAACA TAATGCAGCT TTGTGGTTTT CATCCGAATC GTGTTTATGT GTGGTTTATG
GAGTTATTTG TTGATGCTTA TGACTGGGTC ATGGTTCCAA ATGTTTATGG GATGAGTCAA
TTTGCGGATG GCGGTATTTT CACGACGAAA CCCTATGTAT CTGGGTCTAA TTATGTCCGT
AAAATGTCAG ATTATCCCAA AGGCCCATGG TGTGAGATTT GGGATGGATT ATTTTGGAGT
TTCATCAAGA AACACGAGAC ATTTTTTCGA AGTCAATATC GATTAGCGAT GATGACTCGT
AATTTGGATC GGATGGCACC CGAAACGCTT GCCGCTCATC AGCATCGGGC CAACGATTTT
CTTGAAGGAT TGAACTGA
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| Protein sequence | MSIGGRRRIT VEITLVYPHQ LFAEHPAIQS GRCVALIEDP LFFGTDPSWP IKVHCQRLLL
HRLSMAAYAD DLRNKGYSVQ VQRHDSAVDT NGHLGLLHAA GYRRFHVADP VDHLLEKRLK
AFIDENNCHL EVVDTPLLLT PQLVSEKHFG NGKKPLMAKF YEMQRKRLNI LVDADGAPHG
GQWSFDADNR KKLPKGITVP LEPASPQQID VASILKQLKH EQLPLLGNGD QFNYPVNHQQ
AALWLDQFLD DRFKDFGAYE DAISRYHRVM WHGVLTPMLN IGLLTPRQIL DRTLEYSKKN
DIPLNSLEGF IRQIIGWREF MAVMYRRHGV EMRNSNFWEF EDRPIPDAFY TGNTGLPPID
DAIKHALQTG YCHHIERLML VGNIMQLCGF HPNRVYVWFM ELFVDAYDWV MVPNVYGMSQ
FADGGIFTTK PYVSGSNYVR KMSDYPKGPW CEIWDGLFWS FIKKHETFFR SQYRLAMMTR
NLDRMAPETL AAHQHRANDF LEGLN
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