Gene Syncc9902_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1085 
SymbolhisZ 
ID3742469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1045092 
End bp1046270 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content57% 
IMG OID637771261 
ProductATP phosphoribosyltransferase regulatory subunit 
Protein accessionYP_377093 
Protein GI78184658 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGC AACCAGCCGC TGGCGCAAGG GATCTGAATC CGCACCAGGT GGAAACCAAT 
CGGAACATCA CGGAGCGACT CGCTCGTGTG TTTCGACTTT GGGGTTATGA CGAGGTTTCT
CCGCCCCGTG TGGAACGGAT GAAAACTTTG ATGGCGGGGG GTGCCATCGC CAGTCGCGAC
ATTGTGCGTC TTGTCGCTGA CGACCCATTG GGGTTACGAC CAGAAATGAC GGCATCGATT
GCTCGAGCCG CCTGCACGCG ACTGGCAACA CGACCACGCC CCATGCGTTT GTGGGCATCA
GGCACCGTGT TTCGATCCAG GGCCGCAGAC GAGGGTGGTC AGTGCATTGA AGAAAACCTC
CAGAGCGGAG TGGAGCTATT TGGAGTCGCC GCCATCGAGG CGGAGATGGA ATTGCTCAGC
CTGTTGATGG CATCTATCGC CTCTTTGAAG CTGGGCCCAT CGACGCAACC TCGACTGCTG
TTGGGACATA CCCAACTCAT GGAATTGATC CTTTCTCCAT ACGAGGGTCC AAAACGGGAT
GCGGTGCGTT GGGCTCTGGT CCATTTCGAC CGTCTAGCCG TCGAAACGAT GGAGTTGTTG
CCCAACGAAC GCAAAACACT GCTGTCACTG ATGGAGTGTC GTGGAACGCC AAAAGACGTG
CTCCAGCAGC TACGACACTT GTTTGGCCAA CAACCCGTCT TTGAGGATCT CGATCGCCTT
TGCTCGCTCC TCAGCAAAAC AGCCCTTGAG CAAGACATCG CTCTTCAACT CGACCCCACC
TTTCAACCCC AATTTGAGCT GTACACCGGG TTGGTCTTTC AGCTGGTCTG CAACGGCCGT
TCGGCACCCG TGGTGCTTGC CCGTGGCGGT CGTTACGACG AGCTGGTTCA ACGGTGTGGA
GCACCTGAAA ACCAAGCATT TGGCGCGGGC TTCAGCTTGG CGATCGATCC GATTCGAGAG
CTCCTAGTGG AGGATGAATC GGCAAAAGCA GACACGACGG ACGTGTTGGT GGCCTACTCC
TCGAATTCAA ACTTGGAAAC GGCCCTCGAT CACCAGCAGC AATGGCATGC GAAAGGACAC
AGTGCTGTCC TCGAGCTGCA GCCGATCCGA TCCATGGATG AAGCCCAGGC TCTTGCGCAG
GCTCGCGGGG ACCTACAGCT CGACTGGGTG GATCTTTAA
 
Protein sequence
MALQPAAGAR DLNPHQVETN RNITERLARV FRLWGYDEVS PPRVERMKTL MAGGAIASRD 
IVRLVADDPL GLRPEMTASI ARAACTRLAT RPRPMRLWAS GTVFRSRAAD EGGQCIEENL
QSGVELFGVA AIEAEMELLS LLMASIASLK LGPSTQPRLL LGHTQLMELI LSPYEGPKRD
AVRWALVHFD RLAVETMELL PNERKTLLSL MECRGTPKDV LQQLRHLFGQ QPVFEDLDRL
CSLLSKTALE QDIALQLDPT FQPQFELYTG LVFQLVCNGR SAPVVLARGG RYDELVQRCG
APENQAFGAG FSLAIDPIRE LLVEDESAKA DTTDVLVAYS SNSNLETALD HQQQWHAKGH
SAVLELQPIR SMDEAQALAQ ARGDLQLDWV DL