Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1013 |
Symbol | |
ID | 3743825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 987969 |
End bp | 988844 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637771187 |
Product | ABC transporter |
Protein accession | YP_377021 |
Protein GI | 78184586 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.134252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCTTC TCTTGGAACC CCTGAGTCAC GCCTTCATGG TGCGTGCACT GTTGGTGAGT GCTCTGGTTG GTGGGGTTTG TGGGTTGCTG TCCTGCTACA TGACGCTCAA AGGCTGGGCG CTGATGGGCG ACGCGGTATC CCATGCGGTG TTACCCGGTG TTGTGGTGGC CTATGCCCTT GGTCTGCCGT TTTCGCTTGG AGCGTTTGTG TTTGGGGTGG GTTCAGTCGC TGCCATTGGC TTTGTGAAGC AGAAGTCGCG CGTGAAGGAA GACACCGTGA TCGGTTTGGT CTTCACCGGT TTTTTTGCCC TCGGTTTGGT GTTGGTGTCG AAAACGCGGA GCAATATTGA TCTCACGCAC ATCCTGTTTG GAAATGTGCT CGGTATTAAT GCGGCCGACA TCATTCAAAC CTTGCTGATT TCGCTCTTGG TTTTGGTGAC GTTGTTGGTG TTTCGTCGGG ATTTGATGCT GTTCTGCTTT GACCCCACCC ATGCACGCTC GATTGGCATC AATACAGGGG TTTTGCATTA CATGCTGCTC GGACTGTTGT CCCTCGCGGC TGTTGCAGGA TTGCAAACCG TTGGAATCAT TCTTGTGGTG GCCATGTTGG TCACTCCTGG TGCCACGGCT TACCTCTTGA CCGATCGCTT TGATCGGATG ACGTTGCTAG CAGTCACTAG CAGTGTCTTG TCGAGCTTGT TGGGGGTTTT CGTGAGCTAT TGGACCGACA GCTCAACGGC TGGATGCATC GTGTTGGTGC AAACCGCCCA ATTCCTCTTT GCTTTCTTGT TTGCTCCCCG GCATGGAGTG TTGCGGCGTT ATGCAGTGAT GCCGTCCCTC AGTGGTGACA CCAACGATGA AGAGCGGCTT CGCTGA
|
Protein sequence | MNLLLEPLSH AFMVRALLVS ALVGGVCGLL SCYMTLKGWA LMGDAVSHAV LPGVVVAYAL GLPFSLGAFV FGVGSVAAIG FVKQKSRVKE DTVIGLVFTG FFALGLVLVS KTRSNIDLTH ILFGNVLGIN AADIIQTLLI SLLVLVTLLV FRRDLMLFCF DPTHARSIGI NTGVLHYMLL GLLSLAAVAG LQTVGIILVV AMLVTPGATA YLLTDRFDRM TLLAVTSSVL SSLLGVFVSY WTDSSTAGCI VLVQTAQFLF AFLFAPRHGV LRRYAVMPSL SGDTNDEERL R
|
| |