Gene Syncc9902_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1013 
Symbol 
ID3743825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp987969 
End bp988844 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content54% 
IMG OID637771187 
ProductABC transporter 
Protein accessionYP_377021 
Protein GI78184586 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.134252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTC TCTTGGAACC CCTGAGTCAC GCCTTCATGG TGCGTGCACT GTTGGTGAGT 
GCTCTGGTTG GTGGGGTTTG TGGGTTGCTG TCCTGCTACA TGACGCTCAA AGGCTGGGCG
CTGATGGGCG ACGCGGTATC CCATGCGGTG TTACCCGGTG TTGTGGTGGC CTATGCCCTT
GGTCTGCCGT TTTCGCTTGG AGCGTTTGTG TTTGGGGTGG GTTCAGTCGC TGCCATTGGC
TTTGTGAAGC AGAAGTCGCG CGTGAAGGAA GACACCGTGA TCGGTTTGGT CTTCACCGGT
TTTTTTGCCC TCGGTTTGGT GTTGGTGTCG AAAACGCGGA GCAATATTGA TCTCACGCAC
ATCCTGTTTG GAAATGTGCT CGGTATTAAT GCGGCCGACA TCATTCAAAC CTTGCTGATT
TCGCTCTTGG TTTTGGTGAC GTTGTTGGTG TTTCGTCGGG ATTTGATGCT GTTCTGCTTT
GACCCCACCC ATGCACGCTC GATTGGCATC AATACAGGGG TTTTGCATTA CATGCTGCTC
GGACTGTTGT CCCTCGCGGC TGTTGCAGGA TTGCAAACCG TTGGAATCAT TCTTGTGGTG
GCCATGTTGG TCACTCCTGG TGCCACGGCT TACCTCTTGA CCGATCGCTT TGATCGGATG
ACGTTGCTAG CAGTCACTAG CAGTGTCTTG TCGAGCTTGT TGGGGGTTTT CGTGAGCTAT
TGGACCGACA GCTCAACGGC TGGATGCATC GTGTTGGTGC AAACCGCCCA ATTCCTCTTT
GCTTTCTTGT TTGCTCCCCG GCATGGAGTG TTGCGGCGTT ATGCAGTGAT GCCGTCCCTC
AGTGGTGACA CCAACGATGA AGAGCGGCTT CGCTGA
 
Protein sequence
MNLLLEPLSH AFMVRALLVS ALVGGVCGLL SCYMTLKGWA LMGDAVSHAV LPGVVVAYAL 
GLPFSLGAFV FGVGSVAAIG FVKQKSRVKE DTVIGLVFTG FFALGLVLVS KTRSNIDLTH
ILFGNVLGIN AADIIQTLLI SLLVLVTLLV FRRDLMLFCF DPTHARSIGI NTGVLHYMLL
GLLSLAAVAG LQTVGIILVV AMLVTPGATA YLLTDRFDRM TLLAVTSSVL SSLLGVFVSY
WTDSSTAGCI VLVQTAQFLF AFLFAPRHGV LRRYAVMPSL SGDTNDEERL R