| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0979 |
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| Symbol | |
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| ID | 3743331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 960961 |
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| End bp | 961647 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637771153 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_376989 |
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| Protein GI | 78184554 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.012248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCA CGCCATACCT TCATGATCCA CCGTCATCAG GTTTTGATGA TGCACTGCTG
TCTGTAGCTG TCAACGGCAA AATTGCATTG GCGATGCGAG GTCGTTTTTT TCTACGTTGC
TTTTGTAAGA GTTTTAGTGA AAAATCTCAT ATTGGCTGCG CGGTAACGGA TCAAGATCGA
TGTTTGGAGT ACTTGCGTTC TGATGAGTTT GAATTGTTGA TTTGTACAGA TCAACTTGAG
CGTGGAAATG GTTATGAACT TGTGAGGAGA GCCAAGGAAC AACATTCAAA TCTCAAGGTT
GTTGTTCTTG CTTTGAACGA TGAGATCCCA GTTGAATACG ACAACGCTCC ATGGCTCGAA
GCTGTTGTTG CTGAAGCAGA CATTGTTGAA GACCAAAAAC CCCTCGAAGC CGCTGTCTTG
GCTGTGATGG GGCACCATTC CTATCGCAGT CCATCGTTGC GTGGCAGGGA ATTGCCCTAT
CTCAGTTGCC CGCGTCTTAC CCCACGTGAG TATGAAGTTT TGGATCGCCT CGCCCGTGGC
ATGACTGATA AGGAAATTGC AGAGGCTTTG GTGGTTAGTG AGCAAACATC AAGGACTTAC
ACCAAGCGTT TGCTCAAAAC TCTTGAGGTG AATAACCGTG TGCAGGCTGT TTTGAAGGGA
ATGCGATGCG GCATGGTTCA GCTGTAA
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| Protein sequence | MDLTPYLHDP PSSGFDDALL SVAVNGKIAL AMRGRFFLRC FCKSFSEKSH IGCAVTDQDR
CLEYLRSDEF ELLICTDQLE RGNGYELVRR AKEQHSNLKV VVLALNDEIP VEYDNAPWLE
AVVAEADIVE DQKPLEAAVL AVMGHHSYRS PSLRGRELPY LSCPRLTPRE YEVLDRLARG
MTDKEIAEAL VVSEQTSRTY TKRLLKTLEV NNRVQAVLKG MRCGMVQL
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