Gene Syncc9902_0975 details

Gene Information

• Locus tag: Syncc9902_0975
• ID: 3743327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 957218
• End bp: 957883
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637771149
• Product: short-chain dehydrogenase/reductase
• Protein accession: YP_376985
• Protein GI: 78184550
• COG category: [R] General function prediction only
• COG ID: [COG0300] Short-chain dehydrogenases of various substrate specificities

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.264766
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACGG TTCTCGTAAC GGGTGCAAAT CGCGGCATTG GATTGGAATA CTGTCGACAA 
CTCGCTGCTC GTGGCGATTA TGTCATTGCT GTCTGCCGTA AAGCTGGTCG AGAACTCGAC 
TCGTTAGGGG TACAAATCGA AGCCGGAATT GAACTTACTG ATGCGTCAGC GATCGATGAA 
CTGATGTCTC GTCTCAATCA TCAGTCTCTG GATGGCGTCA TCCTCAATGC CGGTATTTTG 
CACTTCAATG GTTTGCATGA TTTGGATGTT GAGGCCATCC GTCAGCAGTT TGAGGTCAAT 
GCTCTTGCAC CTTTACGTCT TGCGAGCATC TTGACCTCCA ATCTTTCTAG GGGGTCTTGG 
ATTGCACTCA CGACCAGTCG TATGGGATCC ATTGCTGATA ACACTTCCGG TGGATCCTAT 
GGATATCGGA TGTCTAAAGC TGCCTTAAAT ATTGCCGGTA AGTCATTGGC GATCGATCTC 
AAGCCGAAGG GCATTGCTGT CGCCATTCTT CACCCAGGCT TGGTGGCGAC CCGGATGATC 
AATTTCAATC CCAATGGAAC CAGCCCTCAA CAGTCGGTTG AAGGTTTGCT GCAACGGATT 
GATGCTTTAA CGCTTGAAAC GTCTGGCTCG TTTTGGCATG CAAACGGCGA TGCACTGCCT 
TGGTAG 

 

Protein sequence

MATVLVTGAN RGIGLEYCRQ LAARGDYVIA VCRKAGRELD SLGVQIEAGI ELTDASAIDE 
LMSRLNHQSL DGVILNAGIL HFNGLHDLDV EAIRQQFEVN ALAPLRLASI LTSNLSRGSW 
IALTTSRMGS IADNTSGGSY GYRMSKAALN IAGKSLAIDL KPKGIAVAIL HPGLVATRMI 
NFNPNGTSPQ QSVEGLLQRI DALTLETSGS FWHANGDALP W