Gene Syncc9902_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0917 
Symbol 
ID3741941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp904094 
End bp905113 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content56% 
IMG OID637771091 
Producthypothetical protein 
Protein accessionYP_376927 
Protein GI78184492 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.178943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCGGA TCCTGATTAC TGGCGCTAGC GGATGCGTTG GTCAATACGT TTCCCACTGG 
CTCCTCGAGA ATTCCGATGC CGACCTTTTG CTGTGGCTGC GCGATCCAAC GAAACTCACA
GCTGTTTCAG CAGATCACCC CCGCGTTCGT TTGCTCATCG GAGATCTACG CGATACGGAT
CGCTTTGCAG ACGACTTGGC ATCGGTCAAC CGAGTCATTC ACACCGCGAC AGCTTGGGGG
GATCCAGTCC GAGCCGAACA GGTGAATGTT GTTGCGGTGA AGCGATTGCT CGCGTTACTC
AATCCGCAGG TTGTGGAACA GATCATTTAT TTCTCCACGG CCAGCATTCT CGATCGCGAC
CTCAACCCGC TCCCAGAGGC CTTGGCCTAT GGCACTGAAT ACATCCAAAC CAAGGCCCGC
TGCCTCCAAG ATCTTGAGAC GCATCAATTG GCTGACCGGA TCATCGCTGT TTTTCCGACG
TTGGTCTTCG GCGGCAGAGT CGATGGAACC AGTGTGTTCC CGACCAGCTA CCTCACGGAA
GGCTTAGCAG AAGCCAGTCG GTGGCTGTGG TTAGCTCGAT GGCTTCGGGC CGACGCAAGT
TTCCACTTCA TCCATGCCGA GGACATCGCA CGGATCTGTG GGCAATTTGC ACTAGGTCCC
CATGAACCCA ACAAGGAGCC TGGGCAAGGA CGTCTTCGGC GCATCGTCAT GGGTCAGCGA
GCGATTTCGG TGGATCAAAC CGTGGACACT CTCTGCCGCT GGCGCGGAGT GCGTCGCACC
CCTGGTGTTC CGATGTGGCC ATGGCTCATC CAAGCCCTAA TTCGAATCCT TCCGATTGAA
ATCAACGATT GGGATCGGTT CAGCATCCGT CAACGACACT TCATTCACTC CCCAGCGAGC
ACTCCGGAGC GATTCGGTGG CACGAGTCAT GCTCCAAACC TGGAAACAGT TCTTATCGAT
TCAGGGCTTC CGAATCACGG GAAACCGAGA AGGAGTCGTA AAGTCGGTGG ATTCAAATAA
 
Protein sequence
MNRILITGAS GCVGQYVSHW LLENSDADLL LWLRDPTKLT AVSADHPRVR LLIGDLRDTD 
RFADDLASVN RVIHTATAWG DPVRAEQVNV VAVKRLLALL NPQVVEQIIY FSTASILDRD
LNPLPEALAY GTEYIQTKAR CLQDLETHQL ADRIIAVFPT LVFGGRVDGT SVFPTSYLTE
GLAEASRWLW LARWLRADAS FHFIHAEDIA RICGQFALGP HEPNKEPGQG RLRRIVMGQR
AISVDQTVDT LCRWRGVRRT PGVPMWPWLI QALIRILPIE INDWDRFSIR QRHFIHSPAS
TPERFGGTSH APNLETVLID SGLPNHGKPR RSRKVGGFK