Gene Syncc9902_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0907 
Symbol 
ID3743512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp897061 
End bp897702 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content55% 
IMG OID637771081 
Productpeptidase, metallopeptidase 
Protein accessionYP_376917 
Protein GI78184482 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5549] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.20081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTTG ATCCATGCCC GCCCGTTGAA GCGATGCAAG TGTTGGAGGT GAGCTTGGAC 
CGCTCATCTG CGACATCGGC TCCTGGATAC GGCTCTGTCC TGGCCACAAC TTCCTTGGGT 
CCACCAGTGC TTCAGCGCTG GTGTGTGTGG CTCGAGCCCG CTGATCATCA GCCACCCGAT 
CGATGGGAAC AGCGTTGGAC CCTTGCCCTT GAATCGGCCC TTTCTGTTTG GGAGGAGGTG 
TTGCCAATCA CTCGGGTGAA GTCGCCGGCC CAAGCTCATA TTCAAATCTT CCAGCAACGC 
CCTCCGCGCC GGCGCATTGG CTCCAAATGG CGAGCCAGTA ATGGCCGGAG TCGTCTTCAG 
GTCGTAGAGG TTCAGCGTCG GGGTCAGTGG CGACTCGAAC CTCACGTGGA TGTGTTGGTC 
TCTCCAGAGT TGAGAGCCTC AGGGATAGAA GCCACCGCTG TTCATGAACT TGGTCACGCC 
TTTGGGATAT GGGGTCATAG CCCGCAACCT GATGATGTGA TGGCAGTTCA CCAGAATCAA 
ACACCTGTGT TGAATCTCAG CGAGCGCGAT CAAGTTACGT TGAATTGGTT GTATCAAAAG 
GAAACTAATT TCGGCCAATT AATTCAAACA AGCCCGAAAT AA
 
Protein sequence
MPLDPCPPVE AMQVLEVSLD RSSATSAPGY GSVLATTSLG PPVLQRWCVW LEPADHQPPD 
RWEQRWTLAL ESALSVWEEV LPITRVKSPA QAHIQIFQQR PPRRRIGSKW RASNGRSRLQ 
VVEVQRRGQW RLEPHVDVLV SPELRASGIE ATAVHELGHA FGIWGHSPQP DDVMAVHQNQ 
TPVLNLSERD QVTLNWLYQK ETNFGQLIQT SPK