Gene Syncc9902_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0887 
Symbol 
ID3742340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp883073 
End bp883741 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID637771061 
Producthypothetical protein 
Protein accessionYP_376897 
Protein GI78184462 
COG category[S] Function unknown 
COG ID[COG4318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCTTC GACTGTCGGT TTACCAGAAC ATTCCAAAGC CAACGCCAGA CACGCCGCTG 
GTGGAAGTTT CTGTGGCAGC TTTACGCCCC ACGCAGTGGT GCGTTGGCTA TGCCGAGGTT 
TGGGCACGGC AAGTTGATTT TTCCAGTGAC AGTCGCCAAA CACGCCTGGA CTATCTCCGC 
AAAAAGCCTG TGCCAATGGT GCGCAATGCA GCCGGCTCGC TCTGGATGGT GGATCGGCAT 
CACAGGCTGA GATCTCTGCT CGGCATCGAT CCTGAAGCCA CCACATGGGG ATATGTGATT 
GCTGAGGTTG ATGATCAAAA TCCAACGGCG GCGATCACTT ATTTGCAGAC GCAAGGATGG 
CTTTACCTCT ACGACAGTCG TGGACAGGGT CCACGTCATC CCAGTGAGTT GCCACGTTCA 
CTGCTGACGT TGGAAGACGA CCCTTATCGC AGCTTGGTCT GGAAGCTCAA GCAAGAGGGG 
TTGATCAAAC CTCAAGCCCA TATTCCGTAT CACGAATTTC GCTGGGCTGC CTGGCTCCGC 
CAACGGCCAC TACCGCCATT TAGTTCGCGT CAATTGGAGC CTGCACTCGC CCCCGCCAGA 
CGCTTGGTGT GCTCAGAAAG CGCCCGCAAT ATGGCCGGAT GGAAAGGTGA AAAACAGCCT 
GACTCGTGA
 
Protein sequence
MSLRLSVYQN IPKPTPDTPL VEVSVAALRP TQWCVGYAEV WARQVDFSSD SRQTRLDYLR 
KKPVPMVRNA AGSLWMVDRH HRLRSLLGID PEATTWGYVI AEVDDQNPTA AITYLQTQGW 
LYLYDSRGQG PRHPSELPRS LLTLEDDPYR SLVWKLKQEG LIKPQAHIPY HEFRWAAWLR 
QRPLPPFSSR QLEPALAPAR RLVCSESARN MAGWKGEKQP DS